Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   IC769_RS03480 Genome accession   NZ_CP061672
Coordinates   715175..719695 (+) Length   1506 a.a.
NCBI ID   WP_191109041.1    Uniprot ID   -
Organism   Acinetobacter seifertii strain AS23     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 710175..724695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC769_RS03455 (IC769_03455) - 710615..711253 (-) 639 WP_039253235.1 hypothetical protein -
  IC769_RS03460 (IC769_03460) pilG 711536..711919 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  IC769_RS03465 (IC769_03465) - 711943..712305 (+) 363 WP_004705774.1 PleD family two-component system response regulator -
  IC769_RS03470 (IC769_03470) - 712363..712899 (+) 537 WP_004705775.1 chemotaxis protein CheW -
  IC769_RS03475 (IC769_03475) - 712946..715027 (+) 2082 WP_191109040.1 methyl-accepting chemotaxis protein -
  IC769_RS03480 (IC769_03480) chpA 715175..719695 (+) 4521 WP_191109041.1 hybrid sensor histidine kinase/response regulator Regulator
  IC769_RS03485 (IC769_03485) - 719692..720159 (+) 468 WP_004705778.1 hypothetical protein -
  IC769_RS03490 (IC769_03490) - 720361..721747 (+) 1387 Protein_674 coproporphyrinogen-III oxidase family protein -
  IC769_RS03495 (IC769_03495) - 721759..722640 (+) 882 WP_191109042.1 alpha/beta fold hydrolase -
  IC769_RS03500 (IC769_03500) dapE 722777..723909 (-) 1133 Protein_676 succinyl-diaminopimelate desuccinylase -
  IC769_RS03505 (IC769_03505) - 724035..724178 (-) 144 WP_002051109.1 entericidin A/B family lipoprotein -

Sequence


Protein


Download         Length: 1506 a.a.        Molecular weight: 171316.82 Da        Isoelectric Point: 4.3572

>NTDB_id=484004 IC769_RS03480 WP_191109041.1 715175..719695(+) (chpA) [Acinetobacter seifertii strain AS23]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIDEIFVDLQPLLNEWMQFANTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLKLTPAIQGYVQLVFKFYFLKLGDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETITGLELDYIEQDLLAEPIVEDVHTEIEINLNETLALFMEEAEEHLSTINQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYRDFIGESLELLSSNSSSEQLEARLAQFNQSWDAYVEQ
YGDRTDPLMPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPGYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKDSYNV
LLDKPVLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSIQNDLPQQNFTFDEPLFNTEL
EPEVITVENLSDSADWTVLSQSVQQDRQYISSAQVNRNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLMR
YLHTLKGGANMVQATYIGSITHELESIYERLIQKQLIATSSLIDFIRLIQDDLADRLQIMREKQLDYAAPYTINALKRAG
QNSNFQPVPEIEVFDTESEIFSEQQAVSQVLINEVPAETEAVVEELEAHHDQVFDTIVTELATPVEVITSVESSQENEAV
VDEEDITVVVEQTFLEEAAELLEMADVLLKQWFDQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKADLFSSEPVMTFIQGDGTEPPPMM
GVWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRTQRQQANKPEAGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPEQHLEHQDILQLIFHPGLSTADQITQISGRGVGLDVVQSDIKALGGHVSVDS
VYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQP
IPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFASIGAIAGATILGDGQVCLILDGQNIARQIQSA
PRHKQLGEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=484004 IC769_RS03480 WP_191109041.1 715175..719695(+) (chpA) [Acinetobacter seifertii strain AS23]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACTCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTTGTCGAAGAAATTGATGAAATTTTTGTTGATTTGCAGCCATTGTTGAATGAATGGATGCAGTTTGCAAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTTCATACCTTAAAAGGTTCGGGGAGAATGATTGGTGCTAAATCTTCGGCC
GAGCTTGCTTGGACAGTTGAAGATACGCTCAATCGAGTAATCAATCAAAGCCTTAAGCTGACTCCAGCTATTCAAGGCTA
TGTTCAGTTAGTGTTTAAGTTCTATTTCCTTAAATTAGGAGATAACTTTAAGCAAAAACGAGCACATGCAGTAGATTTTA
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATCACTGGGCTTGAGCTAGACTATATTGAGCAAGATTTATTGGCTGAGCCAATTGTTGA
AGATGTACATACTGAAATTGAAATAAATTTAAATGAAACTTTAGCTTTGTTTATGGAAGAGGCGGAAGAGCATTTATCGA
CAATCAATCAGTTCTTAAATCAAGAACTACATCAGTATGATAGCTACAATGCTTTAATACGTGCTCTACATACTTTGCGT
GGCAGTTCTGCAATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACTAAAGTTGAGCACTTATTTAAAATCTTATTGCA
AGAGGAGCTTTCTTCTAATTCAGATGAGATTTTATTATTACAAGAATATCGTGATTTTATTGGAGAGAGCTTAGAACTGC
TATCTAGTAATAGTTCAAGTGAACAGCTTGAAGCGAGATTGGCGCAGTTTAATCAGTCATGGGATGCCTACGTGGAGCAA
TATGGTGATCGAACTGATCCATTAATGCCTTCACATGGTTTGGTGTCGCAATTATTGCTGTTAGATGTTTCTGAGTTACT
AGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAACGAGTTTCCTGGTTATCTTGAACGTCTAAGTGAACAGGCTGATC
TGTTGCTACAGCATACTCACTCTCAAGCAATGCTTGGTTTGCATGAATATACGAGCCAATTGAAAGACAGCTATAATGTA
TTGCTTGATAAACCTGTCTTATTACAATCAGACTATATCTTTGAAATTTATCAGAAAGCGCATCAACAACTTATTCAATT
GTTCGATGCTTTAGCTGCTGGTCAGCGAGTCGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CGTTACATACGCCGAGTATTCAAAACGATTTACCTCAGCAGAATTTTACTTTTGATGAGCCATTATTCAATACTGAACTA
GAACCAGAAGTTATTACGGTAGAGAATTTATCAGATTCTGCTGACTGGACCGTATTAAGCCAGAGTGTACAGCAAGATCG
TCAGTATATTTCATCTGCACAGGTAAATCGAAACTTTGATCCTGACCTTTTGGACATTTTCCTCGAAGAAGCTGATGAGC
TACTTGAGGGGATTGATACTGATCTCAATATATGGGTAGGTGAGCAAGAAAACTTCGCAGCTCTGAACAACTTAATGCGT
TATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCGACTTATATCGGTTCGATTACCCATGAATTAGAAAGCAT
ATATGAGCGTTTAATTCAAAAGCAGTTAATTGCAACTTCATCTCTAATTGATTTTATTCGTTTGATTCAAGATGACTTGG
CCGATCGTCTACAAATCATGCGTGAAAAACAGCTAGATTATGCAGCTCCTTACACAATTAATGCGCTAAAACGAGCAGGT
CAAAACTCTAACTTCCAACCTGTGCCTGAGATTGAAGTATTTGATACTGAAAGTGAGATATTCTCTGAACAACAGGCGGT
GTCTCAAGTATTAATAAATGAGGTACCAGCGGAAACAGAAGCTGTTGTTGAAGAATTAGAAGCTCATCACGATCAAGTAT
TTGATACCATTGTCACTGAATTGGCTACGCCAGTTGAAGTAATAACATCAGTTGAATCCTCGCAAGAGAATGAAGCTGTA
GTTGACGAAGAAGATATTACCGTTGTTGTTGAGCAGACATTCCTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGATGT
GCTATTGAAACAATGGTTTGATCAGCGTACGAACCGTAGTATCTTGCTTCAGTTACAAAGAGCCGTGCACAGTTTGAAGG
GTGGTGCACGCATGGTCGGTTTAGAGGCCGTGTATGCAATTGCTTATCAACTTGAAAATACTTTTGAACAGTTTGCACTG
CATCACTTCAACTCGAATATTTATGACCATCTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCAATTTTCAAGCACAA
CTACCAGCATTTCGATGGACTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCAGCGAAGT
TAACGAAAGCTGATTTGTTTAGCTCAGAACCTGTGATGACCTTTATACAAGGTGATGGTACCGAACCACCACCAATGATG
GGAGTATGGGAGCAAACAGAACGTCTGGATCAAAATAATGAAATGATCCGAGTTTCAGCAGACTTAATTGAGAAGATGAT
TGATTTATCTGGTGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATCTAAGTCAGTTTGGTCATACATTGGTTGAAA
TGGAATTGGCTATTCAACGACTTGCCGATCAGTTACGTCGAATGGAAGGCGAGTTAGAAACACAAATTATTGCCAAACAT
GGTATTGAGCATTCTCGTTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAATCAGTTATCGAAATC
TCTTGCTGAATCTGCATCGGACTTAGTCGACTTTAAAAATACTTTGTCTCACAAGATCAGAGATACAGAAAGTCTGCTTT
TACAACAGTCACGAATTCAGGCAGAAATTCAAGAAGGTTTGATGCGAACACGATTAGTTCCATTTTCACGGTTACTACCA
CGTTTACAGCGAATTGTTCGTCAGACCTCTACTGCATTGAACAGACCTGCTGAGCTTTTTGTAAATAATACTGAAGGTGA
ACTAGACCGTAATATTTTAGAACGTTTGGTAACACCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGCTTAGAAG
ACAGAACACAGCGTCAGCAAGCTAATAAACCTGAAGCTGGGCGTATTGAACTTAATATTCAACGTCAAGGTACAGATGTG
GTCGTTGTCTTTAGTGATGATGGACAAGGTATTGATGTAGAAAAAGTACGTCAAAAAGCACTGCTTGCGGGTCTGATCAA
ACCGGAACAGCACTTGGAACACCAAGATATTTTACAACTGATTTTCCATCCAGGTTTAAGTACAGCAGATCAGATTACTC
AAATCTCTGGGCGTGGTGTTGGACTCGATGTTGTACAAAGCGACATTAAGGCTCTAGGTGGACATGTTAGCGTAGACTCT
GTTTATGGTAAGGGAACAACATTTACTATTCGTGTACCGACTACGGTAGCTGTAAGTGATGCCTTAATGGTGAAAGTGGC
AGATCAGCAATTTGCTATTCCACTTGCTCAAATCGACCGAATTGTTCGAGTTTCACCAGCTTCTTTAGAACAGTATTTTG
AAAGTCCTAAAGAGCTATTCGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCAGAATTTGTGGGTAATCAACCA
ATACCACGTCTAAATGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCTAACAATGGCCAAACTGTGGCTTTACT
TGTTGACCAGTTAATTGGTTCTCGAGCACAAATTGTAGTGAAACCAATTGGCCAACAGTTCGCTAGCATTGGGGCAATTG
CAGGTGCGACTATTTTAGGTGATGGACAAGTTTGCTTAATTTTAGACGGACAAAATATTGCGCGACAAATTCAGTCTGCT
CCACGTCATAAACAGCTTGGTGAAGCAGTATATAGACAACGAGAATCTGACGAGCGCCGTCTCGTTATGATTGTCGATGA
CTCGGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCCAAAGATGGTGTGG
ATGCCATAGAGCAGCTAGAAAATATTAAGCCAGATCTAATGCTGCTTGATATTGAAATGCCGCGTATGGATGGTTTCGAA
GTACTGAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACGTCCCGAACAGGTGAAAAACA
TCGAGAACGAGCATTCTCATTAGGCGTAAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAATTACTAGAGAATATCG
ATGCTTTACTTGTAGCGTTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

91.175

100

0.912