Detailed information    

insolico Bioinformatically predicted

Overview


Name   uvrA   Type   Machinery gene
Locus tag   J7D37_RS16845 Genome accession   NZ_CP072526
Coordinates   3522092..3524926 (+) Length   944 a.a.
NCBI ID   WP_000083355.1    Uniprot ID   A0A0D8FGA4
Organism   Acinetobacter baumannii strain DETAB-E227     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3517092..3529926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7D37_RS16815 (J7D37_16815) - 3517330..3518412 (-) 1083 WP_000680213.1 DUF475 domain-containing protein -
  J7D37_RS16820 (J7D37_16820) tenA 3518675..3519349 (+) 675 WP_000899418.1 thiaminase II -
  J7D37_RS16825 (J7D37_16825) - 3519399..3519740 (-) 342 WP_038347638.1 GlpM family protein -
  J7D37_RS16830 (J7D37_16830) - 3519793..3520146 (-) 354 WP_005130631.1 DUF1304 domain-containing protein -
  J7D37_RS16835 (J7D37_16835) - 3520212..3521189 (-) 978 WP_032037978.1 zinc-binding dehydrogenase -
  J7D37_RS16840 (J7D37_16840) - 3521193..3521795 (-) 603 WP_000826320.1 TetR/AcrR family transcriptional regulator -
  J7D37_RS16845 (J7D37_16845) uvrA 3522092..3524926 (+) 2835 WP_000083355.1 excinuclease ABC subunit UvrA Machinery gene
  J7D37_RS16850 (J7D37_16850) - 3524960..3526666 (-) 1707 WP_000016109.1 GGDEF domain-containing protein -
  J7D37_RS16855 (J7D37_16855) omp33-36 3527659..3528564 (+) 906 WP_000733007.1 porin Omp33-36 -

Sequence


Protein


Download         Length: 944 a.a.        Molecular weight: 104386.69 Da        Isoelectric Point: 6.5117

>NTDB_id=483976 J7D37_RS16845 WP_000083355.1 3522092..3524926(+) (uvrA) [Acinetobacter baumannii strain DETAB-E227]
MSQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSQMEKPEVDSIEG
LSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPYCPEHDLPMVAQTVSEMVDAVKNLEEGTALMLLAPVVRER
KGEYSNLFEQLQGQGFVRARVDGEIIDIDTPPELDKKKKHTIEVVVDRFKVRDDLGNRIAESFETALRLGGDIAVLSWMN
GEHPDRVFSAKHSCPECDRAVAELEPRLFSFNNPFGACPVCDGLGTRSHFSPEKLIPNPELAISEGAIRGWDRQRPYYYS
MLQKVADHFGFQLDTPWNQLDKDTQKKFLQGTGKEKIDLSYIDERGRKHTRVQPFEGILPHLERRYRETESNYVRDDLAQ
YLSNAACDACGGSRLNEISRHVRVKDKTIADITRMSIGDAESYYQGINLEGAKGEIADKIFKEIRERLHFLVSVGLNYLS
LARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGNTVLVVEHDEDAIRAADHIID
IGPGAGVHGGVVIAEGTYDELAKHADSLTGQYLSGKLKIEVPKQRTQPPKPEEKIKLSGAAGHNLKNVDLTIPLGIMTCV
TGVSGSGKSTLINRTLLPLAATQLNGATTLTAEKFDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT
PEAKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEVGYKGKNISDVLEMTVEDAAE
FFSAIPVIHRRLETLTQVGLGYIRLGQAATTLSGGEAQRVKLARELAKRDTGKTLYILDEPTTGLHFHDIAKLLDILHEL
RNKGNTIVVIEHNLDVIKTADWVVDLGPEGGSGGGMIIAEGTPEQVAEVEISHTGRFLKPMLKQ

Nucleotide


Download         Length: 2835 bp        

>NTDB_id=483976 J7D37_RS16845 WP_000083355.1 3522092..3524926(+) (uvrA) [Acinetobacter baumannii strain DETAB-E227]
ATGAGCCAAAGTCATATCCGTATTCGAGGCGCACGCACCCATAACTTAAAAAATGTGTCACTCGATATTCCACGCGACAA
ATTTGTGGTAATTACGGGGCTATCAGGTTCAGGAAAATCTTCTCTTGCCTTTGATACCTTGTATGCCGAAGGACAGCGCC
GTTATGTCGAATCACTTTCGGCCTATGCCCGTCAGTTTTTATCGCAAATGGAAAAACCTGAAGTTGACTCGATTGAAGGT
TTATCACCAGCCATTGCGATTGAGCAAAAGTCTACCAGTCATAACCCACGTTCAACGGTTGGTACGATTACCGAAATTTA
TGACTATTTGCGTCTGCTTTATGCACGTGTCGGTACGCCTTATTGCCCTGAACACGACTTACCTATGGTTGCGCAAACTG
TTTCTGAAATGGTCGATGCGGTAAAGAACCTTGAGGAAGGCACTGCACTCATGTTGCTTGCCCCTGTTGTTCGTGAGCGT
AAAGGTGAATACAGCAACTTGTTCGAACAACTACAAGGTCAAGGTTTTGTTCGTGCGCGTGTTGATGGTGAAATTATTGA
TATTGATACACCACCAGAACTCGACAAAAAGAAAAAACATACCATTGAAGTCGTTGTTGACCGCTTCAAAGTACGTGATG
ATTTAGGCAACCGTATTGCTGAATCATTTGAAACCGCACTGCGTTTAGGTGGCGATATTGCTGTTTTATCATGGATGAAT
GGCGAACACCCTGATCGCGTCTTTTCTGCAAAGCACTCATGCCCTGAATGTGATCGCGCAGTCGCAGAGCTTGAGCCACG
TTTATTTTCATTTAACAACCCGTTTGGTGCGTGCCCTGTCTGTGATGGCTTAGGTACACGTAGCCATTTTAGCCCTGAAA
AACTCATTCCTAACCCTGAACTTGCGATTAGTGAAGGTGCTATTCGTGGTTGGGATCGTCAACGTCCTTATTACTATTCA
ATGCTGCAAAAAGTTGCCGACCATTTCGGTTTTCAACTTGATACACCTTGGAATCAGTTAGATAAAGACACGCAAAAGAA
ATTCTTACAAGGTACTGGCAAAGAAAAAATTGATTTAAGTTATATCGATGAACGCGGTCGTAAACATACACGCGTGCAAC
CGTTTGAAGGAATTTTGCCACACCTTGAGCGCCGTTATCGTGAAACTGAAAGTAACTATGTACGTGATGATTTAGCACAA
TATTTATCTAACGCAGCGTGTGATGCATGTGGCGGTTCACGTCTCAATGAAATTTCACGTCATGTTCGTGTAAAAGATAA
AACCATTGCCGACATTACCCGCATGTCGATTGGAGATGCCGAAAGTTACTATCAAGGTATAAACCTTGAAGGTGCCAAAG
GTGAAATTGCAGATAAAATCTTTAAAGAGATTCGTGAGCGCTTACACTTCTTGGTGAGTGTTGGCCTGAACTATTTAAGT
CTGGCTCGTTCTGCCGAAACACTATCGGGTGGTGAAGCCCAGCGTATCCGTCTAGCTTCGCAAATTGGTGCAGGTTTGAT
GGGTGTCATGTATGTACTCGATGAACCATCAATTGGTCTCCATCAACGTGATAATGATCGTTTATTACAAACGCTAATTC
GCTTACGTGATTTGGGCAATACGGTATTAGTTGTTGAACATGATGAAGATGCAATCCGTGCAGCTGACCATATTATTGAT
ATCGGCCCTGGTGCTGGTGTGCATGGTGGCGTTGTCATTGCTGAAGGTACGTATGATGAGCTGGCTAAACATGCCGACTC
ACTCACAGGCCAATATCTTTCAGGCAAACTCAAAATTGAAGTGCCAAAACAGCGAACTCAACCACCTAAACCTGAAGAAA
AAATTAAACTTTCAGGTGCAGCCGGTCATAACTTAAAAAATGTCGATTTAACCATCCCACTTGGCATTATGACTTGTGTC
ACGGGTGTTTCAGGTTCAGGTAAATCAACACTGATTAATCGTACGTTACTTCCACTGGCTGCAACACAGCTCAACGGTGC
AACGACCTTAACAGCCGAAAAATTTGACTCGATTGATGGTCTTCAACATTTAGATAAAGTCGTTGATATTGACCAAAGCC
CAATTGGCCGTACACCGCGCTCTAATCCAGCGACTTATACGGGTCTATTTACGCCAATTCGTGAGTTATTTGCTCAAACA
CCAGAAGCGAAAGCTCGTGGTTATAGTGCGGGTCGCTTCTCGTTTAACGTAAAAGGCGGACGCTGTGAAGCGTGTGAAGG
CGACGGTATGATTAAAGTCGCAATGCATTTCTTACCAGACATGTATGTACCTTGCGATGCTTGTCATGGTAAGCGCTATA
ACCGTGAAACACTTGAAGTCGGTTATAAAGGCAAAAACATTTCTGACGTTTTAGAAATGACGGTTGAAGATGCTGCTGAG
TTTTTTAGTGCTATTCCAGTTATTCACCGTCGTTTAGAAACCTTAACTCAGGTAGGTCTAGGCTATATTCGTTTAGGTCA
GGCGGCTACTACTTTATCTGGTGGTGAAGCGCAACGTGTAAAACTTGCACGTGAGTTAGCAAAACGAGATACAGGTAAAA
CGCTTTATATCTTGGATGAACCGACAACAGGTCTACATTTCCATGATATTGCCAAGTTACTCGATATTTTGCATGAGCTA
CGCAACAAGGGTAATACCATAGTGGTAATTGAACATAACCTTGATGTCATTAAAACAGCAGACTGGGTTGTCGACTTAGG
TCCAGAGGGTGGTTCGGGCGGTGGTATGATCATTGCTGAAGGGACACCTGAACAAGTAGCCGAGGTCGAGATTTCCCATA
CTGGCCGCTTCTTGAAACCGATGTTGAAACAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D8FGA4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

56.25

100

0.563

  uvrA Streptococcus pneumoniae TIGR4

56.25

100

0.563

  uvrA Streptococcus pneumoniae D39

56.25

100

0.563