Detailed information NTG0483976

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC771_RS08635
• Genome accession: NZ_CP061666
• Coordinates: 1807566..1808381 (+)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS25
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1802566..1813381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC771_RS08600 (IC771_08595)	kdsB	1803091..1803852 (+)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IC771_RS08605 (IC771_08600)	-	1803864..1804844 (+)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC771_RS08610 (IC771_08605)	-	1804857..1805198 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
IC771_RS08615 (IC771_08610)	-	1805216..1805989 (+)	774	WP_077168509.1	TatD family hydrolase	-
IC771_RS08620 (IC771_08615)	-	1806027..1806635 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC771_RS08625 (IC771_08620)	-	1806645..1807196 (+)	552	WP_004701984.1	type II secretion system protein	-
IC771_RS08630 (IC771_08625)	xcpV	1807186..1807566 (+)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC771_RS08635 (IC771_08630)	xcpW	1807566..1808381 (+)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC771_RS08640 (IC771_08635)	gspK	1808381..1809337 (+)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC771_RS08645 (IC771_08640)	-	1809567..1810163 (+)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC771_RS08650 (IC771_08645)	ung	1810214..1810927 (+)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC771_RS08655 (IC771_08650)	-	1810924..1812048 (+)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC771_RS08660 (IC771_08655)	tadA	1812056..1812558 (+)	503	Protein_1698	tRNA adenosine(34) deaminase TadA	-
IC771_RS08665 (IC771_08660)	-	1812628..1813068 (+)	441	WP_107973453.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=483976 IC771_RS08635 WP_077168510.1 1807566..1808381(+) (xcpW) [Acinetobacter seifertii strain AS25]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483976 IC771_RS08635 WP_077168510.1 1807566..1808381(+) (xcpW) [Acinetobacter seifertii strain AS25]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79