Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   IC773_RS16375 Genome accession   NZ_CP061660
Coordinates   3421879..3426399 (-) Length   1506 a.a.
NCBI ID   WP_151792815.1    Uniprot ID   A0A7H2VSY8
Organism   Acinetobacter seifertii strain AS31     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3416879..3431399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC773_RS16350 (IC773_16345) - 3417393..3417536 (+) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  IC773_RS16355 (IC773_16350) dapE 3417662..3418795 (+) 1134 WP_068936426.1 succinyl-diaminopimelate desuccinylase -
  IC773_RS16360 (IC773_16355) - 3418932..3419813 (-) 882 WP_151792817.1 alpha/beta fold hydrolase -
  IC773_RS16365 (IC773_16360) - 3419825..3421213 (-) 1389 WP_151792816.1 coproporphyrinogen-III oxidase family protein -
  IC773_RS16370 (IC773_16365) - 3421415..3421882 (-) 468 WP_190977788.1 hypothetical protein -
  IC773_RS16375 (IC773_16370) chpA 3421879..3426399 (-) 4521 WP_151792815.1 hybrid sensor histidine kinase/response regulator Regulator
  IC773_RS16380 (IC773_16375) - 3426547..3428628 (-) 2082 WP_004705776.1 methyl-accepting chemotaxis protein -
  IC773_RS16385 (IC773_16380) - 3428675..3429211 (-) 537 WP_004705775.1 chemotaxis protein CheW -
  IC773_RS16390 (IC773_16385) - 3429269..3429631 (-) 363 WP_004705774.1 PleD family two-component system response regulator -
  IC773_RS16395 (IC773_16390) pilG 3429655..3430038 (-) 384 WP_077168706.1 twitching motility response regulator PilG Regulator
  IC773_RS16400 (IC773_16395) - 3430322..3430960 (+) 639 WP_049064413.1 hypothetical protein -

Sequence


Protein


Download         Length: 1506 a.a.        Molecular weight: 171387.95 Da        Isoelectric Point: 4.3540

>NTDB_id=483900 IC773_RS16375 WP_151792815.1 3421879..3426399(-) (chpA) [Acinetobacter seifertii strain AS31]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIDEIFVDLQPLLNEWMQSANTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLKLTPAIQGYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLELS
NTLTAETMTGLELDYIEQDLLAEPIVEDVHTEIEINLNETLALFMEEAEEHLSTINQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYRDFIGESLELLSSNSSNEQLEARLAQFNQSWDAYVEQ
HGDRTDPLMPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPGYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKDSYNV
LLDKPVLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSIQNDLPQQNFTFDEPLFNTEL
EPEVITVENLSDSADWTILSQSVQQDRQYISSVQVNRNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLMR
YLHTLKGGANMVQATYIGSITHELESIYERLIQKQLIATSPLIDFIRLIQDDLADRLQIMREKQLDYAAPYTINALKQAG
KNSNFQPVPEVEVFDTESEIFSEQEVVSQVLINEVPAETEVVVDELEAHHDQVFDTVVTELATPVEVITSVESSQENEAV
VDEEDITVVVEQTFLEEAAELLEMADVLLKQWFDQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKADLFSSEPVMTFIQGDGTEPPPMM
GVWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRTQRQQANKPEAGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPEQHLEHQDILQLIFHPGLSTADQITQISGRGVGLDVVQSDIKALGGHVSVDS
VYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQP
IPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFASIGAIAGATILGDGQVCLILDGQNIARQIQST
PRHKQLGEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=483900 IC773_RS16375 WP_151792815.1 3421879..3426399(-) (chpA) [Acinetobacter seifertii strain AS31]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTTGTCGAAGAAATTGATGAAATTTTTGTTGATTTGCAGCCATTGTTGAATGAATGGATGCAGTCTGCAAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTTCATACCTTAAAAGGTTCGGGGAGAATGATTGGTGCTAAATCTTCGGCC
GAGCTTGCTTGGACAGTTGAAGATACGCTCAATCGAGTAATCAATCAAAGCCTTAAGCTGACTCCAGCTATTCAAGGCTA
TGTTCAGTTAGTGTTTAAGTTCTATTTCCTTAAATTAGTAGATAACTTTAAGCAAAAACGAGCACATGCAGTAGATTTTA
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTAGAACTTTCA
AATACGCTTACTGCCGAAACAATGACTGGGCTTGAGCTAGACTATATTGAGCAAGATTTATTGGCTGAGCCAATTGTTGA
AGATGTACATACTGAAATTGAAATAAATCTAAATGAAACTTTAGCCTTGTTTATGGAAGAGGCGGAAGAGCATTTATCGA
CAATCAATCAGTTCTTAAATCAAGAACTACATCAGTATGATAGCTACAATGCTTTAATACGTGCTCTACATACTTTGCGT
GGCAGTTCTGCAATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACTAAAGTTGAGCACTTATTTAAAATCTTATTGCA
AGAGGAGCTTTCTTCTAATTCAGATGAGATTTTATTATTACAAGAATATCGTGATTTTATTGGCGAGAGCTTAGAACTGC
TATCTAGCAATAGTTCAAATGAACAGCTTGAAGCGAGATTGGCGCAGTTTAATCAGTCATGGGATGCCTACGTGGAGCAA
CATGGTGATCGAACTGATCCATTAATGCCTTCACATGGTTTGGTGTCACAATTATTGCTGCTAGATGTTTCTGAGTTACT
AGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAACGAGTTTCCTGGTTATCTTGAACGTCTAAGTGAACAGGCTGATC
TGTTGCTACAGCATACTCACTCTCAAGCAATGCTTGGTTTGCATGAATATACAAGCCAATTGAAAGACAGCTATAATGTA
TTGCTTGATAAACCTGTCTTGTTGCAATCAGACTATATTTTTGAAATTTATCAAAAAGCGCATCAACAACTTATTCAATT
GTTCGATGCTTTAGCTGCTGGTCAGCGAGTGGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CGTTACATACGCCGAGTATTCAAAACGATTTACCTCAGCAGAATTTTACTTTTGATGAGCCACTATTCAATACTGAACTA
GAACCAGAAGTTATTACGGTAGAGAATTTATCAGATTCCGCCGACTGGACCATATTAAGCCAGAGTGTACAGCAAGATCG
TCAGTATATTTCATCTGTACAGGTAAATCGAAACTTTGATCCTGATCTTTTGGACATTTTCCTTGAAGAAGCTGATGAGC
TACTTGAGGGGATTGATACTGATCTCAATATATGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAACTTAATGCGC
TATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCGACTTATATCGGTTCGATTACCCATGAATTAGAAAGCAT
ATATGAACGTTTAATTCAAAAGCAGTTAATTGCAACCTCACCTCTAATTGATTTTATTCGTTTGATTCAAGATGATTTGG
CCGATCGTCTACAAATCATGCGTGAAAAACAGCTAGATTATGCAGCTCCTTACACAATTAATGCGTTAAAACAAGCGGGT
AAAAACTCTAACTTCCAACCTGTGCCTGAGGTTGAAGTATTTGATACTGAAAGTGAGATATTCTCTGAACAAGAGGTGGT
GTCTCAAGTATTAATAAATGAGGTACCAGCGGAAACAGAAGTTGTTGTTGACGAATTAGAAGCTCATCACGATCAAGTAT
TTGATACCGTTGTTACTGAATTGGCTACGCCAGTTGAAGTAATAACATCAGTTGAATCCTCGCAAGAGAATGAAGCTGTA
GTTGACGAAGAAGATATTACAGTTGTTGTTGAGCAGACATTCCTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGATGT
GCTATTGAAACAATGGTTTGATCAGCGTACGAACCGTAGTATTTTGCTTCAGTTACAAAGAGCCGTGCACAGTTTGAAGG
GTGGTGCACGCATGGTCGGTTTAGAGGCCGTATATGCAATTGCTTATCAACTGGAAAATACTTTTGAACAGTTTGCACTG
CATCACTTCAACTCGAATATTTATGACCATCTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCAATTTTCAAGCACAA
CTACCAGCATTTCGATGGACTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCAGCGAAGT
TAACGAAAGCTGATTTGTTTAGCTCAGAACCTGTGATGACCTTTATACAAGGTGATGGTACCGAACCACCACCAATGATG
GGAGTATGGGAGCAAACAGAACGTCTGGATCAAAATAATGAAATGATCCGAGTTTCAGCAGATTTAATTGAGAAGATGAT
TGATTTATCTGGTGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATCTAAGTCAGTTTGGTCATACATTGGTTGAAA
TGGAATTGGCTATTCAACGACTTGCCGATCAGTTACGTCGAATGGAAGGCGAATTAGAAACACAAATTATTGCCAAACAT
GGTATTGAGCATTCTCGTTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAATCAGTTATCGAAATC
TCTTGCTGAATCTGCATCGGACTTAGTCGACTTTAAAAATACGTTGTCTCACAAGATCAGAGATACAGAAAGTCTGCTTT
TACAACAGTCACGAATTCAGGCAGAAATTCAAGAAGGTTTGATGCGAACACGATTAGTTCCATTTTCACGGTTACTACCA
CGTTTACAGCGAATTGTTCGTCAGACCTCTACTGCATTGAACAGACCTGCTGAGCTTTTTGTAAATAATACTGAAGGTGA
ACTAGACCGTAATATTTTAGAACGCTTGGTAACACCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGCTTAGAAG
ACAGAACACAACGTCAGCAAGCTAATAAACCTGAAGCTGGGCGTATTGAACTTAATATTCAACGTCAAGGTACAGATGTG
GTCGTTGTCTTTAGTGATGATGGACAAGGTATTGATGTAGAAAAAGTACGTCAAAAAGCACTGCTTGCGGGTCTGATCAA
ACCGGAACAGCACTTGGAACACCAAGATATTTTACAACTGATTTTCCATCCAGGTTTAAGTACAGCAGATCAGATTACTC
AAATCTCTGGGCGTGGTGTTGGACTCGATGTTGTACAAAGCGACATTAAGGCTCTAGGTGGACATGTTAGCGTAGACTCT
GTTTATGGTAAGGGAACAACATTTACTATTCGTGTACCGACTACGGTAGCTGTAAGTGATGCCTTAATGGTGAAAGTGGC
AGATCAGCAATTTGCGATTCCACTTGCTCAAATCGACCGAATTGTTCGAGTTTCACCAGCTTCTTTAGAACAGTATTTTG
AAAGTCCTAAAGAGCTATTCGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCAGAATTTGTGGGTAATCAACCA
ATACCACGTCTAAACGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCTAACAATGGCCAAACTGTGGCTTTACT
TGTTGACCAGTTAATTGGTTCTCGAGCACAAATTGTAGTGAAACCAATTGGCCAACAGTTCGCTAGCATTGGGGCAATTG
CAGGTGCGACTATTTTAGGTGATGGACAAGTTTGCTTAATTTTAGACGGACAAAATATTGCGCGACAAATTCAGTCTACT
CCGCGTCATAAACAGCTTGGTGAAGCAGTATATAGACAACGAGAATCTGACGAGCGCCGTCTCGTTATGATTGTCGATGA
CTCGGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCCAAAGATGGTGTGG
ATGCCATAGAGCAGCTAGAAAACATTAAGCCAGATCTAATGCTACTTGATATTGAAATGCCGCGTATGGATGGTTTCGAA
GTATTGAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACGTCCCGAACAGGTGAAAAACA
TCGAGAACGAGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAATTACTAGAGAATATCG
ATGCTTTACTTGTAGCGTTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

91.241

100

0.913