Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   IC776_RS01865 Genome accession   NZ_CP061646
Coordinates   401251..403479 (-) Length   742 a.a.
NCBI ID   WP_191012518.1    Uniprot ID   A0A7H2V8J2
Organism   Acinetobacter seifertii strain AS39     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 396251..408479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC776_RS01845 (IC776_01845) - 396432..397394 (-) 963 WP_191012515.1 DnaJ C-terminal domain-containing protein -
  IC776_RS01850 (IC776_01850) - 397545..398156 (-) 612 WP_191012516.1 LysE family translocator -
  IC776_RS01855 (IC776_01855) - 398293..399168 (-) 876 WP_004699009.1 Hsp33 family molecular chaperone HslO -
  IC776_RS01860 (IC776_01860) - 399334..401175 (-) 1842 WP_191012517.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  IC776_RS01865 (IC776_01865) priA 401251..403479 (-) 2229 WP_191012518.1 primosomal protein N' Machinery gene
  IC776_RS01870 (IC776_01870) gspF 403628..404833 (+) 1206 WP_004699003.1 type II secretion system inner membrane protein GspF -
  IC776_RS01875 (IC776_01875) gspG 404857..405372 (+) 516 WP_004710774.1 type II secretion system major pseudopilin GspG -
  IC776_RS01880 (IC776_01880) - 405638..405982 (+) 345 WP_019456903.1 hypothetical protein -
  IC776_RS01885 (IC776_01885) - 406042..406302 (-) 261 WP_191012519.1 DUF2798 domain-containing protein -
  IC776_RS01890 (IC776_01890) - 406535..406873 (+) 339 WP_019456905.1 tRNA-binding protein -
  IC776_RS01895 (IC776_01895) lnt 406875..408434 (-) 1560 WP_191012520.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 83986.81 Da        Isoelectric Point: 8.3577

>NTDB_id=483803 IC776_RS01865 WP_191012518.1 401251..403479(-) (priA) [Acinetobacter seifertii strain AS39]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTKAQYERAQVGSRVAISFGRQSLIGIITEKVDPQESFTGTFQLKAISELL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKIIPCDNVEALLKRSIKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLIDCTLEPHDFSPAPVQLAQMPLTLNDDQKKATQHVINAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYHLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNEPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGDIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWAQ
LVHAPRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=483803 IC776_RS01865 WP_191012518.1 401251..403479(-) (priA) [Acinetobacter seifertii strain AS39]
ATGACCATAACGCCAAAACCTGATTCAGTTGTTTATCGTGTGCGTGTTGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCAAAGCACAATATGAACGGGCTCAGGTAGGTTCACGCGTCGCGATTTCATTTGGACGCCAAAGCTTAA
TTGGCATCATTACCGAAAAAGTTGATCCACAAGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGAACTTTTA
GATGAAGAACCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCTGCCCAGTATTACCAATTTCCGATTGGTGA
AGTGATGCAAACGGCCCTACCCGCGTTATTGCGTCAGGGTAAACCAATGGATGTATTGTTTCATCTATGGAAAATCATTC
CTTGTGACAATGTTGAAGCCTTGTTAAAGCGTTCCATTAAGCAACAAGATGCATATCAAATTTTAAAATTACATCCTGCC
GGAACCACTGAAAATATTCTCAATTTAAGTGGCGTAGAAACTGCAACACTCAAAGCGCTTCAAAAGAAGGGGCTAATAGA
CTGTACACTTGAACCTCATGACTTTAGTCCAGCACCTGTGCAATTGGCTCAAATGCCACTTACCCTAAATGATGATCAAA
AGAAGGCAACTCAGCACGTCATTAATGCACAGCATCAATACCAAGCATTTTTACTAGATGGCTTAACTGGAAGTGGTAAA
ACTGAAGTTTATTTACACATCATGCATGAGGTGTTAAAACAAGGTAAGCAAGTCCTAGTATTGGTTCCTGAAATTGGCTT
AACCCCTCAAACTATTTCGCGCTTTAAGTCTCGTTTTAACTGCGATATTGCTTTATTGCATTCAGGCTTAAATGACTCTA
AACGCTTACAAGCATGGCAACAGGCACAAACTGGTAAAGCATCTATTATTTTAGGGACTCGTTCCGCCATTTATACGCCG
TTGCCACGTCTGGGCCTCATCATTTTAGATGAAGAACACGACCTGTCTTATAAGCAGCAAGAAGGCTTCCGTTATCATGC
GCGTGATGTCGCACTGTACCGAGGCCACTTACAAAACTGCCCTGTTATTTTAGGTTCGGCGACTCCAAGCATCGACAGTT
ATCACTTGGTAGAAACTGGTAAGTTAACTTCACTGCAACTTAACCAACGTGCAGGCCACGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAGCAGCATGGTATTAGTCAGCCTTTAATCGAGCAGATTAAAAATACCCTAGCAAG
AAAAGAACAGGTTTTAATTTTTTTAAATCGTCGTGGCTATGCGCCTGTACTTGTGTGTGAAAGCTGTGGATGGCAAGCGA
ATTGTCCACATTGCGATGCGCATTTTACGTTACACACTCAGCCTTATTCTTATTTACATTGTCACCACTGCGGCACGGTT
CATCGCTTGCCAGACCACTGCCCTGAATGTCAGCAGAAGAGTTTAAAAACTTTAGGTGCTGGGACAGCTAAGGTTGAAGA
ACACTTACAAGAGTTATTCCCAGATTATGATGTGATTCGAGTCGATCGTGACAGCACCAGTCGTGTCGGTAGTTGGCAAA
AAATCTATGATCGTATTCATCAAAACGAACCCACAATTTTGCTTGGTACTCAAATGTTGGCAAAAGGTCACCATTTTCCA
CATGTGACCTTGGTTGCTATTTTAGATATTGATGCAGGTTTACTGAGTGTCGATATTCGGGCGCCAGAACGTACTGCGCA
GCTGATTGTACAAGTGGCTGGTCGTGCAGGTCGTGGAGAACACAAAGGCCATGTTTATTTACAGACTTTAAGGCCAGATC
ATCCTTTACTCACTACACTCATCGAAAAAGATTATCGGGCGGTTGCGAAACAAACATTAGCTGAACGTAAAGTTGCTTTA
CTGCCACCTTATCGTTATGCGGTCTTAATTCGTGCCGAGTCGAAAGATCGTGACTATACCTTGCATTTCTTAAATGAAGC
TGCCGAACAGCTTCGCCAAATTGCAGGTGATATTGTTGATATTTGGGGGCCGATTCCAGCACCAATGGAACGTAAAGCGG
GACGTTACCGCGCACATATGGTGATTTTATCTGCCGACCGTGCTCGTCTGCATTTTTACTTAAGACAATGGTGGGCTCAG
TTGGTTCATGCACCAAGACAGCATCAACTTAGACTCTCTATTGATGTTGATCCGCAAGAATTTAGTTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H2V8J2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.305

100

0.973