Detailed information NTG0483776

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC777_RS08660
• Genome accession: NZ_CP061640
• Coordinates: 1809788..1810603 (+)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS40
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1804788..1815603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC777_RS08625 (IC777_08620)	kdsB	1805313..1806074 (+)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IC777_RS08630 (IC777_08625)	-	1806086..1807066 (+)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC777_RS08635 (IC777_08630)	-	1807079..1807420 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
IC777_RS08640 (IC777_08635)	-	1807438..1808211 (+)	774	WP_077168509.1	TatD family hydrolase	-
IC777_RS08645 (IC777_08640)	-	1808249..1808857 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC777_RS08650 (IC777_08645)	-	1808867..1809418 (+)	552	WP_004701984.1	type II secretion system protein	-
IC777_RS08655 (IC777_08650)	xcpV	1809408..1809788 (+)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC777_RS08660 (IC777_08655)	xcpW	1809788..1810603 (+)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC777_RS08665 (IC777_08660)	gspK	1810603..1811559 (+)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC777_RS08670 (IC777_08665)	-	1811789..1812385 (+)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC777_RS08675 (IC777_08670)	ung	1812436..1813149 (+)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC777_RS08680 (IC777_08675)	-	1813146..1814270 (+)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC777_RS08685 (IC777_08680)	tadA	1814278..1814780 (+)	503	Protein_1701	tRNA adenosine(34) deaminase TadA	-
IC777_RS08690 (IC777_08685)	-	1814850..1815290 (+)	441	WP_107973453.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=483776 IC777_RS08660 WP_077168510.1 1809788..1810603(+) (xcpW) [Acinetobacter seifertii strain AS40]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483776 IC777_RS08660 WP_077168510.1 1809788..1810603(+) (xcpW) [Acinetobacter seifertii strain AS40]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79