Detailed information    

insolico Bioinformatically predicted

Overview

Name   recU   Type   Machinery gene
Locus tag   J7S31_RS06735 Genome accession   NZ_CP072523
Coordinates   1309326..1309934 (+) Length   202 a.a.
NCBI ID   WP_002983622.1    Uniprot ID   P65998
Organism   Streptococcus pyogenes strain SHZ-1     
Function   plasmid transformation; homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1304326..1314934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7S31_RS06705 (J7S31_06680) - 1304576..1305058 (+) 483 WP_002988938.1 S-ribosylhomocysteine lyase -
  J7S31_RS06710 (J7S31_06685) - 1305203..1306672 (-) 1470 WP_032461860.1 cell division site-positioning protein MapZ family protein -
  J7S31_RS06715 (J7S31_06690) - 1306686..1307840 (-) 1155 WP_002988932.1 class I SAM-dependent RNA methyltransferase -
  J7S31_RS06725 (J7S31_06700) gpsB 1308285..1308611 (-) 327 WP_002983626.1 cell division regulator GpsB -
  J7S31_RS06730 (J7S31_06705) - 1308730..1309245 (-) 516 WP_002994217.1 DUF1273 domain-containing protein -
  J7S31_RS06735 (J7S31_06710) recU 1309326..1309934 (+) 609 WP_002983622.1 Holliday junction resolvase RecU Machinery gene
  J7S31_RS06740 (J7S31_06715) pbp1a 1309921..1312086 (+) 2166 WP_011054843.1 penicillin-binding protein PBP1A -
  J7S31_RS06745 (J7S31_06720) pepC 1312553..1313890 (-) 1338 WP_011054844.1 aminopeptidase C -
  J7S31_RS06750 (J7S31_06725) nadE 1314075..1314899 (-) 825 WP_011054845.1 ammonia-dependent NAD(+) synthetase -

Sequence

Protein


Download         Length: 202 a.a.        Molecular weight: 23356.93 Da        Isoelectric Point: 9.8725

>NTDB_id=483724 J7S31_RS06735 WP_002983622.1 1309326..1309934(+) (recU) [Streptococcus pyogenes strain SHZ-1]
MVNYPHNLIRQKVSSVQKQTKQNKVDFANRGMSFEAAINATNDYYLSRQIAVIHKKPTPVQIVKVDYPKRSRAKIVEAYF
RQASTTDYCGVYKGHYVDFEAKETRQKTAMPMKNFHLHQIEHMACVLHQKGICFVLLHFSTLKETYYLPAQALISFYQID
NGSKSMPIDYIRKNGFKVAFGAFPQVPYLNIIEQNFLGGDYN

Nucleotide


Download         Length: 609 bp        

>NTDB_id=483724 J7S31_RS06735 WP_002983622.1 1309326..1309934(+) (recU) [Streptococcus pyogenes strain SHZ-1]
ATGGTTAATTATCCTCATAATCTTATTCGACAAAAAGTAAGTTCCGTTCAAAAGCAAACAAAGCAAAATAAGGTGGACTT
CGCCAATAGAGGTATGTCCTTTGAAGCTGCTATCAACGCGACAAATGATTATTATTTATCTCGTCAAATAGCTGTCATTC
ACAAAAAACCTACTCCTGTCCAAATTGTCAAAGTGGATTACCCTAAGCGCAGTCGGGCAAAAATCGTTGAAGCATACTTT
AGACAAGCTTCAACGACTGACTATTGCGGCGTTTATAAAGGACATTATGTTGATTTTGAAGCAAAAGAAACCAGGCAAAA
AACAGCTATGCCCATGAAAAATTTCCATTTACATCAGATTGAACATATGGCTTGCGTTTTACATCAAAAAGGAATCTGCT
TTGTCCTTCTTCACTTTTCCACACTGAAGGAGACTTACTACCTACCTGCTCAAGCCTTGATTTCATTTTATCAGATAGAT
AATGGCAGTAAATCGATGCCCATTGATTATATCAGAAAAAATGGCTTTAAGGTAGCATTTGGAGCCTTTCCACAAGTCCC
TTATTTAAACATAATTGAACAAAATTTTTTAGGCGGTGATTACAATTAA

Domains

Predicted by InterProScan.

Recombination protein U (RecU)

(30-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65998

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recU Bacillus subtilis subsp. subtilis str. 168

51.269

97.525

0.5