Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   J7U05_RS06150 Genome accession   NZ_CP072443
Coordinates   1178848..1179528 (-) Length   226 a.a.
NCBI ID   WP_116920292.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24724     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1173848..1184528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U05_RS06130 (J7U05_06110) - 1174373..1174894 (-) 522 WP_011681345.1 YkgJ family cysteine cluster protein -
  J7U05_RS06135 (J7U05_06115) - 1174979..1176979 (-) 2001 WP_116920291.1 ABC transporter permease -
  J7U05_RS06140 (J7U05_06120) - 1176981..1177739 (-) 759 WP_014608483.1 ABC transporter ATP-binding protein -
  J7U05_RS06145 (J7U05_06125) - 1177884..1178858 (-) 975 WP_024009971.1 sensor histidine kinase -
  J7U05_RS06150 (J7U05_06130) braR 1178848..1179528 (-) 681 WP_116920292.1 response regulator transcription factor Regulator
  J7U05_RS06155 (J7U05_06135) - 1179972..1180552 (+) 581 Protein_1158 xanthine phosphoribosyltransferase -
  J7U05_RS06160 (J7U05_06140) - 1180552..1181820 (+) 1269 WP_116920293.1 nucleobase:cation symporter-2 family protein -
  J7U05_RS06165 (J7U05_06145) - 1181948..1183297 (+) 1350 WP_014608488.1 MATE family efflux transporter -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26264.60 Da        Isoelectric Point: 4.7140

>NTDB_id=483608 J7U05_RS06150 WP_116920292.1 1178848..1179528(-) (braR) [Streptococcus thermophilus strain S24724]
MYKILLVEDDEVIRQQVKKILEQWEYEVVLVEDFMEVLSLFVKEEPHLVLMDIGLPLFNGYHWCQEIRKVSKMPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQSLLEYMGVILNLKAMDLVYQGEVVSLTKNEFQIL
QVLFERSGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLKDFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=483608 J7U05_RS06150 WP_116920292.1 1178848..1179528(-) (braR) [Streptococcus thermophilus strain S24724]
ATGTATAAGATTTTATTAGTTGAGGACGACGAGGTTATCCGTCAACAAGTCAAGAAAATACTAGAACAGTGGGAGTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCTCTTTTTGTAAAAGAAGAACCCCACTTGGTTCTTATGGATATTG
GTTTACCTCTATTCAACGGTTATCACTGGTGTCAGGAAATTCGGAAGGTCTCCAAGATGCCTATTATGTTCTTGTCTTCC
AGAGATCAGGCCATGGATATCGTTATGGCAATCAATATGGGTGGGGACGACTTTGTGACTAAACCCTTTGACCAAAATGT
TCTCTTGGCAAAAATTCAAGGGCTTTTGCGCCGATCTTATGAGTTTGGAAAGGATCAGAGTCTTTTGGAATATATGGGTG
TGATTCTGAACCTTAAGGCCATGGATCTGGTTTATCAGGGAGAAGTCGTTTCTTTGACTAAGAATGAATTTCAGATTTTA
CAAGTTCTCTTTGAGCGTTCTGGTAATATCGTTAGTCGTGAAGACCTCATGAAGGAGCTTTGGAATAGTGACTTCTTTAT
TGATGATAACACTCTCTCTGTAAATGTGGCACGTTTACGTAAGAAGTTAGAGGCAGTTGGTTTGAAGGACTTTATTGAAA
CCAAGAAAGGTGTCGGTTACGGGTTGCGTCATGATGGATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

51.376

96.46

0.496