Detailed information NTG0483489

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC787_RS08765
• Genome accession: NZ_CP061598
• Coordinates: 1827630..1828445 (+)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS58
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1822630..1833445

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC787_RS08730 (IC787_08725)	kdsB	1823153..1823914 (+)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IC787_RS08735 (IC787_08730)	-	1823926..1824906 (+)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC787_RS08740 (IC787_08735)	-	1824919..1825260 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
IC787_RS08745 (IC787_08740)	-	1825278..1826051 (+)	774	WP_077168509.1	TatD family hydrolase	-
IC787_RS08750 (IC787_08745)	-	1826089..1826697 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC787_RS08755 (IC787_08750)	-	1826707..1827260 (+)	554	Protein_1718	type II secretion system protein	-
IC787_RS08760 (IC787_08755)	xcpV	1827250..1827630 (+)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC787_RS08765 (IC787_08760)	xcpW	1827630..1828445 (+)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC787_RS08770 (IC787_08765)	gspK	1828445..1829401 (+)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC787_RS08775 (IC787_08770)	-	1829631..1830227 (+)	597	WP_077168512.1	6-carboxytetrahydropterin synthase	-
IC787_RS08780 (IC787_08775)	ung	1830278..1830991 (+)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC787_RS08785 (IC787_08780)	-	1830988..1832112 (+)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC787_RS08790 (IC787_08785)	tadA	1832120..1832621 (+)	502	Protein_1725	tRNA adenosine(34) deaminase TadA	-
IC787_RS08795 (IC787_08790)	-	1832691..1833131 (+)	441	WP_107973453.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=483489 IC787_RS08765 WP_077168510.1 1827630..1828445(+) (xcpW) [Acinetobacter seifertii strain AS58]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483489 IC787_RS08765 WP_077168510.1 1827630..1828445(+) (xcpW) [Acinetobacter seifertii strain AS58]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79