Detailed information NTG0483404

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC789_RS08880
• Genome accession: NZ_CP061592
• Coordinates: 1863441..1864256 (+)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS60
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1858441..1869256

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC789_RS08845 (IC789_08840)	kdsB	1858966..1859727 (+)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IC789_RS08850 (IC789_08845)	-	1859739..1860719 (+)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC789_RS08855 (IC789_08850)	-	1860732..1861073 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
IC789_RS08860 (IC789_08855)	-	1861091..1861864 (+)	774	WP_077168509.1	TatD family hydrolase	-
IC789_RS08865 (IC789_08860)	-	1861902..1862510 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC789_RS08870 (IC789_08865)	-	1862520..1863071 (+)	552	WP_004701984.1	type II secretion system protein	-
IC789_RS08875 (IC789_08870)	xcpV	1863061..1863441 (+)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC789_RS08880 (IC789_08875)	xcpW	1863441..1864256 (+)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC789_RS08885 (IC789_08880)	gspK	1864256..1865212 (+)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC789_RS08890 (IC789_08885)	-	1865442..1866038 (+)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC789_RS08895 (IC789_08890)	ung	1866089..1866802 (+)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC789_RS08900 (IC789_08895)	-	1866799..1867923 (+)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC789_RS08905 (IC789_08900)	tadA	1867931..1868433 (+)	503	Protein_1748	tRNA adenosine(34) deaminase TadA	-
IC789_RS08910 (IC789_08905)	-	1868503..1868943 (+)	441	WP_107973453.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=483404 IC789_RS08880 WP_077168510.1 1863441..1864256(+) (xcpW) [Acinetobacter seifertii strain AS60]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483404 IC789_RS08880 WP_077168510.1 1863441..1864256(+) (xcpW) [Acinetobacter seifertii strain AS60]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79