Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   IC793_RS02700 Genome accession   NZ_CP061571
Coordinates   538254..539138 (+) Length   294 a.a.
NCBI ID   WP_077163570.1    Uniprot ID   A0A7H2PSM8
Organism   Acinetobacter seifertii strain AS70     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 533254..544138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC793_RS02675 (IC793_02675) - 533652..534899 (-) 1248 WP_004705421.1 YihY family inner membrane protein -
  IC793_RS02680 (IC793_02680) wrbA 535185..535778 (+) 594 WP_191017655.1 NAD(P)H:quinone oxidoreductase -
  IC793_RS02685 (IC793_02685) - 535833..536408 (-) 576 WP_002050789.1 xanthine phosphoribosyltransferase -
  IC793_RS02690 (IC793_02690) - 536480..537193 (-) 714 WP_151683667.1 DUF3108 domain-containing protein -
  IC793_RS02695 (IC793_02695) - 537351..538021 (-) 671 Protein_526 hypothetical protein -
  IC793_RS02700 (IC793_02700) tonB2 538254..539138 (+) 885 WP_077163570.1 energy transducer TonB Machinery gene
  IC793_RS02705 (IC793_02705) ybeY 539226..539705 (-) 480 WP_004705432.1 rRNA maturation RNase YbeY -
  IC793_RS02710 (IC793_02710) - 539982..541070 (-) 1089 WP_004705435.1 PhoH family protein -
  IC793_RS02715 (IC793_02715) miaB 541108..542561 (-) 1454 Protein_530 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33558.35 Da        Isoelectric Point: 7.5649

>NTDB_id=483277 IC793_RS02700 WP_077163570.1 538254..539138(+) (tonB2) [Acinetobacter seifertii strain AS70]
MLKKRSLPIEPFLYWWQDRVFIVAIILAILLHTLVLLIHFAMPAPSEQSTKEIAISIRPAEDAVKHADFLAQADQQGSGT
FREAHRMSSNSPTPMTTDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLESQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHSVLDEAAKASVRRGAPFGHFDSNMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=483277 IC793_RS02700 WP_077163570.1 538254..539138(+) (tonB2) [Acinetobacter seifertii strain AS70]
ATGTTGAAAAAAAGAAGTCTTCCTATAGAGCCTTTTCTTTATTGGTGGCAAGACCGAGTCTTTATCGTTGCAATAATACT
CGCAATCTTGTTGCATACTCTTGTGCTGCTTATTCATTTTGCTATGCCTGCGCCGTCAGAGCAATCCACAAAAGAAATCG
CTATATCTATTCGTCCTGCTGAGGATGCTGTTAAGCATGCAGATTTTTTAGCGCAAGCAGACCAACAAGGTTCAGGAACT
TTTCGAGAGGCTCATCGGATGTCTAGTAATTCTCCGACGCCTATGACTACTGATGCTTCGACGGGAGAAGCCCAGTTAGA
AACTTTAGAAAAAGTACAGCAACAAAGAGAACTTAAGTTTGAAGAAAAAGTACTCATGACTGTGTTGAGCTGGCAGAAAC
AAGCTGAGGAGAGTCAAAGAAAGAAAGCACTTGAGCAATTAGAAAGCCAGTTTCAAGCTAAAGCTGCAATGGTCGCGAGC
CTAGAAGCTCAATATTTACAACGTCAGCAAGATTTCAGTCGTCAACAAAAAATAAAAACAGTCGATGGTATTCAAGCCAA
GAAAGATGCTTCAGCAGCTTATTTAGATAAGTTCCGTGAAAAGGTGGAGCTTTACGGTAATCGTTATTATCCAGAAGAAG
CTAAACAACAACAATTAAAAGGTGAAGTTCGCCTTATGGTGATTTTGAATGCTCAAGGGGGCATTCGTGCAATTCGTTTA
CTTGAAAGTTCAGGACATTCAGTTTTAGATGAAGCTGCAAAAGCTTCTGTACGTCGTGGTGCACCATTTGGTCATTTTGA
TAGCAATATGAAAGATATTTCTGAACTACGTATTATTCGTACTTGGCGTTTTGATCCAGCTGAAGCTGAATTTGAGGTAC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H2PSM8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

94.558

100

0.946