Detailed information NTG0483204

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC796_RS10700
• Genome accession: NZ_CP061561
• Coordinates: 2201160..2201861 (-)
• Length: 233 a.a.
• NCBI ID: WP_151685282.1
• Uniprot ID: A0A7H2PM09
• Organism: Acinetobacter seifertii strain AS73
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2196160..2206861

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC796_RS10670 (IC796_10665)	-	2196471..2196911 (-)	441	WP_019458999.1	SRPBCC family protein	-
IC796_RS10675 (IC796_10670)	tadA	2196981..2197483 (-)	503	Protein_2103	tRNA adenosine(34) deaminase TadA	-
IC796_RS10680 (IC796_10675)	-	2197491..2198615 (-)	1125	WP_151685288.1	enoyl-CoA hydratase/isomerase family protein	-
IC796_RS10685 (IC796_10680)	ung	2198612..2199325 (-)	714	WP_151685286.1	uracil-DNA glycosylase	-
IC796_RS10690 (IC796_10685)	-	2199376..2199972 (-)	597	WP_039251397.1	6-pyruvoyl trahydropterin synthase family protein	-
IC796_RS10695 (IC796_10690)	gspK	2200202..2201160 (-)	959	Protein_2107	type II secretion system minor pseudopilin GspK	-
IC796_RS10700 (IC796_10695)	xcpW	2201160..2201861 (-)	702	WP_151685282.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC796_RS10705 (IC796_10700)	xcpV	2201861..2202241 (-)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC796_RS10710 (IC796_10705)	-	2202231..2202782 (-)	552	WP_004701984.1	type II secretion system protein	-
IC796_RS10715 (IC796_10710)	-	2202792..2203400 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC796_RS10720 (IC796_10715)	-	2203438..2204211 (-)	774	WP_151742451.1	TatD family hydrolase	-
IC796_RS10725 (IC796_10720)	-	2204229..2204570 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
IC796_RS10730 (IC796_10725)	-	2204583..2205563 (-)	981	WP_151685278.1	DNA polymerase III subunit delta'	-
IC796_RS10735 (IC796_10730)	kdsB	2205575..2206336 (-)	762	WP_039251406.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26470.41 Da
• Isoelectric Point: 9.7031

>NTDB_id=483204 IC796_RS10700 WP_151685282.1 2201160..2201861(-) (xcpW) [Acinetobacter seifertii strain AS73]
MIKNKYFCTRSKVSRLTARSSSARLARASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKIYRLKYTNLNTSNNEQPLS
STLLSQVDQYQVMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQVTVAGVSYEWVYSLNQSNLALSQQGGS

Nucleotide

• Length: 702 bp

>NTDB_id=483204 IC796_RS10700 WP_151685282.1 2201160..2201861(-) (xcpW) [Acinetobacter seifertii strain AS73]
ATGATAAAAAATAAGTACTTTTGCACCCGAAGCAAAGTTTCACGTCTTACGGCGCGATCGAGCAGTGCTCGATTAGCTCG
CGCATCAGGATTTACGTTGGTTGAGTTATTGGTTGCGATTGCTATTTTCGCGGTTTTATCTTTATTGGGGTGGAAAATAT
TCGATTATTTGCTCAAGGTGCGTGATCGTAACGCTGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTCTGCAAATTATTCCTTTATCTGCAAATCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACTGATCCTTTAAAACAGGGTTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCTGACCAAAAAAAAATATATCGTCTTAAATATACAAATTTAAATACTTCGAATAACGAGCAACCTTTATCA
AGTACCTTATTAAGCCAAGTTGACCAATATCAAGTTATGGTTTTGACTCCGCAAGAAGTAACAAAATGGCCCGAAGTTAA
TATTGATCCAACAAAACCTAACGAGTTAAAAAAATTACCGAAAGGAATAAAAATCCAAGTTACAGTTGCAGGAGTAAGTT
ATGAATGGGTTTATAGCTTAAATCAAAGCAACTTGGCACTTTCTCAGCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A7H2PM09

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	92.275	100	0.923