Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   IC796_RS03540 Genome accession   NZ_CP061561
Coordinates   720208..724728 (+) Length   1506 a.a.
NCBI ID   WP_151686035.1    Uniprot ID   A0A7H2PT50
Organism   Acinetobacter seifertii strain AS73     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 715208..729728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC796_RS03520 (IC796_03520) pilG 716569..716952 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  IC796_RS03525 (IC796_03525) - 716976..717338 (+) 363 WP_004705774.1 PleD family two-component system response regulator -
  IC796_RS03530 (IC796_03530) - 717396..717932 (+) 537 WP_004705775.1 chemotaxis protein CheW -
  IC796_RS03535 (IC796_03535) - 717979..720060 (+) 2082 WP_077162437.1 methyl-accepting chemotaxis protein -
  IC796_RS03540 (IC796_03540) chpA 720208..724728 (+) 4521 WP_151686035.1 hybrid sensor histidine kinase/response regulator Regulator
  IC796_RS03545 (IC796_03545) - 724725..725192 (+) 468 WP_004705778.1 hypothetical protein -
  IC796_RS03550 (IC796_03550) - 725394..726539 (+) 1146 Protein_689 radical SAM protein -
  IC796_RS03555 (IC796_03555) - 726593..727525 (+) 933 WP_002048759.1 IS5 family transposase -
  IC796_RS03560 (IC796_03560) - 727534..727830 (+) 297 Protein_691 radical SAM protein -
  IC796_RS03565 (IC796_03565) - 727842..728723 (+) 882 WP_077162440.1 alpha/beta fold hydrolase -

Sequence


Protein


Download         Length: 1506 a.a.        Molecular weight: 171406.07 Da        Isoelectric Point: 4.3711

>NTDB_id=483201 IC796_RS03540 WP_151686035.1 720208..724728(+) (chpA) [Acinetobacter seifertii strain AS73]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIDEIFVDLQPLLNEWMQSTNTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLKLTPAIQGYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETITGLELDYIEQDLLAEPIVEDVHTEIEINLNETLALFMEEAEEHLSTINQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYREFIGESLELLSSNSSSEQLEARLAQFNQSWDAYVEQ
HGDRTDPLMPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPGYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKDSYNI
LLDKPVLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSIQNDLPQQNFTFDEPLFNTQL
EPEVITVENLSDSADWTVLSQSVQQDRQYISSAQVNRNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLMR
YLHTLKGGVNMVQATYIGSITHELESIYERLIQKQLIATSPLIDFIRLIQDDLADRLQIMREKQLDYAAPYTINALKQAG
KNSNFQPVPEVEVFDTESEIFSEQEVVSQVLINEVPAETEVVVDELEAHHDQVFDTVVTELATPIELITSVESLQQNEAV
VDEEDITVVVEQTFLEEAAELLEMADVLLKQWFDQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKADLFSSEPVMTFIQGDGTEPPPMM
GVWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRTQRQQANKPEAGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPEQHLEHQDILQLIFHPGLSTADQITQISGRGVGLDVVQSDIKALGGHVSVDS
VYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQP
IPRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFASIGAIAGATILGDGQVCLILDGQNIARQIQST
PRHKQLGEAVYRQRESDERRLVMIVDDSVTVRKVTSRLIERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=483201 IC796_RS03540 WP_151686035.1 720208..724728(+) (chpA) [Acinetobacter seifertii strain AS73]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACTCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTTGTCGAAGAAATTGATGAAATTTTTGTTGATTTGCAGCCATTGTTGAATGAATGGATGCAGTCTACAAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTTCATACCTTAAAAGGTTCGGGGAGAATGATTGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGATACGCTTAATCGAGTAATCAACCAAAGCCTTAAGCTGACTCCAGCTATTCAGGGCTA
TGTTCAGTTAGTGTTTAAGTTCTATTTCCTTAAATTAGTAGATAACTTTAAGCAAAAACGAGCACATGCAGTAGATTTTA
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATCACTGGGCTTGAGCTAGACTATATTGAGCAAGATTTATTGGCTGAGCCAATTGTTGA
AGATGTACATACTGAAATTGAAATAAATCTAAATGAAACTTTAGCCTTGTTTATGGAAGAGGCGGAAGAGCATTTATCGA
CAATTAATCAGTTCTTAAATCAAGAACTACATCAGTATGATAGCTACAATGCTTTAATACGTGCTCTACACACTTTGCGT
GGCAGTTCTGCAATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACTAAAGTTGAGCACTTATTTAAAATCTTATTGCA
AGAGGAGCTTTCTTCTAATTCAGATGAGATTTTATTATTACAAGAATATCGTGAGTTTATTGGCGAGAGCTTAGAACTGC
TATCTAGCAATAGTTCAAGTGAACAGCTTGAAGCGAGATTGGCGCAGTTTAATCAATCATGGGATGCTTACGTGGAGCAA
CATGGTGATCGAACTGATCCATTAATGCCTTCACATGGTTTGGTGTCGCAATTATTGCTGCTAGATGTTTCTGAGTTACT
AGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAACGAGTTTCCTGGTTATCTTGAACGTCTAAGTGAACAGGCTGATC
TGTTGCTACAGCATACTCACTCTCAAGCAATGCTTGGTTTGCATGAATATACGAGCCAATTGAAAGACAGCTATAATATA
TTGCTTGATAAACCTGTCTTGTTGCAATCAGACTATATTTTTGAAATTTATCAGAAAGCGCATCAACAACTTATTCAATT
GTTCGATGCTTTAGCTGCTGGTCAGCGAGTCGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CGTTACATACGCCGAGTATTCAAAATGATTTACCTCAGCAGAATTTTACTTTTGATGAGCCACTATTCAATACCCAACTA
GAACCGGAAGTTATTACGGTAGAGAATTTATCAGATTCCGCCGACTGGACCGTATTAAGCCAGAGTGTACAGCAAGATCG
TCAGTATATTTCATCTGCACAGGTAAATCGAAACTTTGATCCTGACCTTTTGGACATTTTTCTCGAAGAAGCTGATGAGC
TACTTGAGGGGATTGATACTGATCTCAATATATGGGTAGGTGAGCAAGAAAACTTTGCAGCTTTGAACAACTTAATGCGT
TATTTGCATACCTTGAAAGGGGGAGTAAATATGGTTCAGGCGACTTATATCGGTTCGATTACCCATGAATTAGAAAGCAT
ATATGAGCGTCTAATTCAAAAGCAGTTAATTGCAACTTCACCTCTAATTGATTTTATTCGTTTGATTCAAGATGACTTGG
CCGATCGTCTACAAATCATGCGTGAAAAACAGCTAGATTATGCGGCTCCTTACACCATTAATGCGTTAAAACAAGCGGGT
AAAAACTCTAACTTCCAACCTGTGCCTGAGGTTGAAGTATTTGATACTGAAAGTGAGATATTCTCTGAACAAGAGGTGGT
GTCTCAAGTATTAATAAATGAGGTACCAGCGGAAACAGAAGTTGTTGTTGACGAATTAGAAGCTCATCACGATCAAGTAT
TTGATACCGTTGTTACTGAATTGGCTACGCCAATTGAACTAATAACATCAGTTGAATCTTTGCAACAGAATGAAGCTGTA
GTTGACGAAGAAGATATTACCGTTGTTGTTGAGCAGACATTCCTCGAAGAAGCTGCTGAATTGTTAGAAATGGCTGATGT
GCTATTGAAACAATGGTTTGATCAGCGTACGAACCGTAGTATCTTGCTTCAGTTACAAAGAGCCGTGCACAGTTTGAAGG
GGGGTGCACGCATGGTCGGTTTAGAGGCCGTGTATGCAATTGCTTATCAACTGGAAAATACTTTTGAACAGTTTGCACTG
CATCACTTCAACTCGAATATTTATGACCATCTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCAATTTTCAAGCACAA
CTATCAGCACTTCGATGGACTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCAGCGAAGT
TAACGAAAGCTGATTTGTTTAGCTCAGAACCTGTGATGACCTTTATACAAGGTGATGGTACCGAACCACCACCAATGATG
GGAGTATGGGAGCAGACAGAACGTCTGGATCAAAATAATGAAATGATCCGAGTTTCAGCAGACTTAATCGAGAAGATGAT
TGATTTATCTGGTGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATCTAAGTCAGTTTGGTCATACATTGGTTGAAA
TGGAATTGGCTATTCAACGACTTGCCGATCAGTTACGTCGAATGGAAGGCGAATTAGAAACACAAATTATTGCCAAACAT
GGTATTGAGCATTCTCGTTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCGTCTTTAAATCAGTTATCGAAATC
TCTTGCTGAATCTGCATCGGACTTAGTCGACTTTAAAAATACGTTGTCTCACAAGATCAGAGATACAGAAAGTCTGCTTT
TACAACAATCACGAATTCAAGCAGAAATTCAAGAAGGTTTGATGCGAACACGATTAGTTCCATTTTCACGGTTACTACCA
CGGTTACAGCGAATTGTTCGTCAGACCTCTACTGCATTGAACAGACCTGCTGAGCTTTTTGTAAATAATACTGAAGGTGA
ACTAGATCGTAATATTTTAGAACGCTTGGTAACACCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGCTTAGAAG
ACAGAACACAACGTCAACAAGCTAATAAACCTGAAGCTGGACGTATTGAACTCAATATTCAACGTCAAGGTACAGATGTG
GTTGTTGTCTTTAGCGATGATGGACAAGGTATTGATGTAGAAAAAGTACGTCAGAAAGCACTGCTTGCGGGTCTGATCAA
ACCGGAACAGCACTTGGAACACCAAGATATTTTACAACTGATTTTCCATCCGGGTTTAAGTACCGCAGATCAGATTACTC
AAATCTCTGGGCGTGGTGTTGGACTCGATGTTGTACAAAGCGATATTAAGGCTCTAGGTGGACATGTTAGCGTAGACTCT
GTTTATGGTAAGGGAACAACATTTACTATTCGTGTACCAACTACAGTAGCTGTAAGTGATGCCTTAATGGTGAAAGTGGC
AGATCAGCAATTTGCGATTCCACTTGCTCAAATCGACCGAATTGTTCGAGTTTCACCAGCTTCTTTAGAACAGTATTTTG
AAAGTCCTAAAGAGCTATTCGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCAGAATTTGTAGGTAATCAACCA
ATACCACGTCTAAATGGCGTGATGTATTCATTACCTGTCTTAATGATTAAAGCAAACAATGGTCAAACAGTGGCTTTACT
TGTTGACCAGTTAATTGGTTCTCGAGCACAAATTGTAGTGAAACCAATTGGACAACAGTTCGCTAGCATTGGGGCAATTG
CAGGTGCGACTATTTTAGGTGATGGACAAGTTTGCTTAATTTTAGATGGACAAAATATTGCGCGACAAATTCAGTCTACT
CCGCGTCATAAACAGCTTGGTGAAGCAGTATATAGACAACGTGAATCTGACGAGCGCCGTCTCGTTATGATTGTCGATGA
CTCGGTAACTGTACGTAAGGTAACGTCTCGATTAATTGAACGCCAAGGCTACGATGTTGTTACGGCTAAAGATGGTGTGG
ATGCCATAGAGCAGCTAGAAAATATTAAGCCAGATCTAATGCTACTTGATATTGAAATGCCGCGTATGGATGGTTTCGAA
GTACTGAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACGTCCCGAACAGGTGAAAAACA
TCGAGAACGAGCATTCTCATTAGGCGTAAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAATTACTAGAGAATATCG
ATGCTTTACTTGTAGCGTTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

91.175

100

0.912