Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   IC797_RS16535 Genome accession   NZ_CP061556
Coordinates   3482549..3484777 (+) Length   742 a.a.
NCBI ID   WP_191105719.1    Uniprot ID   -
Organism   Acinetobacter seifertii strain AS74     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3477549..3489777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC797_RS16510 (IC797_16510) - 3479085..3479423 (-) 339 WP_000434938.1 tRNA-binding protein -
  IC797_RS16515 (IC797_16515) - 3479656..3479916 (+) 261 WP_019456904.1 DUF2798 domain-containing protein -
  IC797_RS16520 (IC797_16520) - 3479977..3480321 (-) 345 WP_049065188.1 hypothetical protein -
  IC797_RS16525 (IC797_16525) gspG 3480587..3481171 (-) 585 WP_039251176.1 type II secretion system major pseudopilin GspG -
  IC797_RS16530 (IC797_16530) gspF 3481195..3482400 (-) 1206 WP_100192273.1 type II secretion system inner membrane protein GspF -
  IC797_RS16535 (IC797_16535) priA 3482549..3484777 (+) 2229 WP_191105719.1 primosomal protein N' Machinery gene
  IC797_RS16540 (IC797_16540) - 3484853..3486694 (+) 1842 WP_107972870.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  IC797_RS16545 (IC797_16545) - 3486860..3487735 (+) 876 WP_004699009.1 Hsp33 family molecular chaperone HslO -
  IC797_RS16550 (IC797_16550) - 3487872..3488483 (+) 612 WP_004699012.1 LysE family translocator -
  IC797_RS16555 (IC797_16555) - 3488634..3489596 (+) 963 WP_019456898.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 83996.85 Da        Isoelectric Point: 8.6622

>NTDB_id=483180 IC797_RS16535 WP_191105719.1 3482549..3484777(+) (priA) [Acinetobacter seifertii strain AS74]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTKAQYERAQVGSRVAISFGRQNLIGIITEKVDPQESFTGNFQLKAISELL
DDEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKIIPCDNVEALLKRSIKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLIDCTLEPHDFSPAPVQLAQMPLTLNDDQKKATQHVINAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYHLVETGKLTSLQLNQRAGHALLPKMH
LIDLKVVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKNRDYTLHFLNEAAEQLRQIAGDIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWAQ
LVHAPRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=483180 IC797_RS16535 WP_191105719.1 3482549..3484777(+) (priA) [Acinetobacter seifertii strain AS74]
ATGACCATAACGCCAAAACCTGATTCAGTTGTTTATCGTGTGCGTGTTGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCAAAGCACAATATGAACGGGCTCAGGTAGGTTCACGCGTCGCGATTTCATTTGGACGGCAAAACCTAA
TTGGTATCATTACTGAAAAAGTTGACCCACAAGAATCATTTACAGGTAACTTTCAGCTTAAAGCCATTTCTGAACTTTTA
GATGATGAACCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCTGCCCAGTATTACCAATTTCCGATTGGTGA
AGTGATGCAAACGGCCCTACCCGCGTTATTGCGTCAGGGTAAACCAATGGATGTATTGTTTCATCTATGGAAAATCATTC
CTTGTGACAATGTTGAAGCCTTGTTAAAGCGTTCCATTAAGCAACAAGATGCATATCAAATTTTAAAATTACATCCTGCC
GGAACTACAGAAAATATTCTTAATTTAAGTGGTGTAGAAACTGCGACACTTAAAGCACTTCAAAAGAAAGGACTGATAGA
CTGTACACTTGAGCCTCATGATTTTAGCCCAGCACCTGTGCAATTGGCTCAAATGCCACTTACCCTAAATGATGATCAAA
AGAAGGCAACTCAGCACGTCATTAATGCACAGCATCAATACCAAGCATTTTTACTAGATGGCTTAACTGGAAGTGGTAAA
ACTGAAGTTTATTTGCACATCATGCATGAGGTGTTAAAACAAGGTAAGCAAGTCCTAGTATTGGTTCCTGAAATTGGCTT
AACCCCTCAAACTATTTCGCGCTTTAAGTCTCGTTTTAACTGCGATATTGCTTTATTGCATTCAGGCTTAAATGACTCTA
AACGCTTACAAGCATGGCAACAGGCACAAACTGGCAAAGCCTCTATTATTTTAGGGACTCGTTCCGCCATTTATACGCCG
CTGCCACGTCTGGGCCTCATCATTTTAGATGAAGAACACGACCTGTCTTATAAGCAGCAAGAAGGCTTCCGTTATCATGC
GCGTGATGTCGCACTGTACCGAGGCCACTTACAAAACTGCCCTGTTATTTTAGGTTCGGCGACTCCAAGCATCGACAGTT
ATCACTTAGTAGAAACTGGTAAGTTAACTTCACTGCAACTGAACCAGCGTGCAGGCCACGCGCTTTTACCTAAAATGCAT
TTGATAGATCTTAAAGTTGTCAAAAAGCAGCATGGTATTAGCCAGCCTTTAATCGAGCAAATTAAAAATACCCTAGCAAG
AAAAGAACAGGTTTTAATTTTTTTAAACCGTCGTGGTTATGCACCTGTATTGGTTTGTGAAAGCTGTGGATGGCAAGCAA
ATTGTCCACATTGCGATGCACATTTTACGTTGCATACTCAGCCTTATTCTTATTTGCATTGTCACCACTGTGGCACAGTT
CATCGCTTGCCAGACCACTGCCCTGAGTGTCAGCAGAAGAGTTTAAAAACTTTAGGTGCCGGAACAGCCAAAGTTGAAGA
GCACTTACAAGAGTTATTCCCAGATTATGATGTGATTCGAGTCGATCGTGACAGCACCAGTCGTGTCGGTAGTTGGCAAA
AAATCTATGATCGTATTCATCAAAACAAACCCACAATTTTGCTTGGTACTCAAATGTTGGCAAAGGGTCACCATTTTCCA
CATGTGACCTTGGTTGCTATTTTAGATATTGATGCAGGTTTACTGAGTGTCGATATTCGGGCGCCAGAACGTACTGCGCA
GTTGATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGAGAACACAAAGGTCATGTTTATTTACAGACTTTAAGGCCAGATC
ATCCTTTACTCACCACACTCATCGAAAAAGATTATCGGGCAGTCGCAAAACAAACTCTGGCTGAGCGTAAAGTTGCATTA
CTGCCGCCTTATCGTTATGCAGTTTTAATTCGTGCTGAATCGAAAAATCGTGACTATACATTGCATTTTTTAAATGAAGC
TGCCGAGCAACTTCGCCAAATTGCAGGTGATATTGTTGATATTTGGGGGCCGATTCCAGCACCAATGGAACGTAAAGCGG
GACGTTACCGCGCCCATATGGTGATTTTGTCTGCCGACCGTGCTCGTCTGCATTTTTACTTAAGACAATGGTGGGCTCAG
TTGGTTCATGCACCAAGACAGCATCAACTTAGACTCTCTATTGATGTTGACCCGCAAGAATTTAGTTAG

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.035

100

0.97