Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   IC797_RS03430 Genome accession   NZ_CP061556
Coordinates   703560..708080 (+) Length   1506 a.a.
NCBI ID   WP_191105956.1    Uniprot ID   -
Organism   Acinetobacter seifertii strain AS74     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 698560..713080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC797_RS03405 (IC797_03405) - 699001..699639 (-) 639 WP_039253235.1 hypothetical protein -
  IC797_RS03410 (IC797_03410) pilG 699922..700305 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  IC797_RS03415 (IC797_03415) - 700329..700691 (+) 363 WP_004705774.1 PleD family two-component system response regulator -
  IC797_RS03420 (IC797_03420) - 700749..701284 (+) 536 Protein_660 chemotaxis protein CheW -
  IC797_RS03425 (IC797_03425) - 701331..703412 (+) 2082 WP_151761890.1 methyl-accepting chemotaxis protein -
  IC797_RS03430 (IC797_03430) chpA 703560..708080 (+) 4521 WP_191105956.1 hybrid sensor histidine kinase/response regulator Regulator
  IC797_RS03435 (IC797_03435) - 708077..708544 (+) 468 WP_004705778.1 hypothetical protein -
  IC797_RS03440 (IC797_03440) - 708746..710137 (+) 1392 WP_191105957.1 coproporphyrinogen-III oxidase family protein -
  IC797_RS03445 (IC797_03445) - 710146..711027 (+) 882 WP_191105958.1 alpha/beta fold hydrolase -
  IC797_RS03450 (IC797_03450) dapE 711164..712297 (-) 1134 WP_004705781.1 succinyl-diaminopimelate desuccinylase -
  IC797_RS03455 (IC797_03455) - 712423..712566 (-) 144 WP_002051109.1 entericidin A/B family lipoprotein -

Sequence


Protein


Download         Length: 1506 a.a.        Molecular weight: 171253.86 Da        Isoelectric Point: 4.3741

>NTDB_id=483165 IC797_RS03430 WP_191105956.1 703560..708080(+) (chpA) [Acinetobacter seifertii strain AS74]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIDEIFVDLQPLLNEWMQSANTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLKLTPAIQGYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETITGLELDYIEQDLLAEPIVEDVHTEIEINLNETLALFMEEAEEHLSTINQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYREFIGESLELLSSNSSSEQLEARLAQFNQSWDAYVEQ
HGDRTDPLMPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPGYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKDSYNV
LLDKPVLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSIQNDLPHQNFTFDEPLFNTEL
EPEVITVENLSDSADWTVLSQSVQQDRQYISSAQVNRNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLMR
YLHTLKGGANMVQATYIGSITHELESIYERLIQKQLIATSPLIDFIRLIQDDLADRLQIMREKQLDYAAPYTINALKQAG
KNSNFQPVPEVEVFDTESEIFSEQEVVSQVLINEVPAETEVVVDELEAHHDQVFDTVVTELATPVEVITSVESSQENEAV
VDEEDITVVVEQTFLEEAAELLEMADVLLKQWFDQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKADLFSSEPVMTFIQGDGTEPPPMM
GVWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRTQRQQANKPEAGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPGQHLEHQDILQLIFHPGLSTADQITQISGRGVGLDVVQSDIKALGGHVSVDS
VYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQP
MPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFASIGAIAGATILGDGQVCLILDGQNIARQIQST
PRHKLLGEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=483165 IC797_RS03430 WP_191105956.1 703560..708080(+) (chpA) [Acinetobacter seifertii strain AS74]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACTCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTTGTCGAAGAAATTGATGAAATTTTTGTTGATTTGCAGCCATTGTTGAATGAATGGATGCAGTCTGCAAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTTCATACCTTAAAAGGTTCGGGGAGAATGATTGGTGCTAAATCTTCGGCC
GAGCTTGCTTGGACAGTTGAAGATACGCTCAATCGAGTAATCAATCAAAGCCTTAAGCTGACTCCAGCTATTCAAGGCTA
TGTTCAGTTAGTGTTTAAGTTCTATTTCCTTAAATTAGTAGATAACTTTAAGCAAAAACGAGCACATGCAGTAGATTTTA
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATCACTGGGCTTGAGCTAGACTATATTGAGCAAGATTTATTGGCTGAGCCAATTGTTGA
AGATGTACATACTGAAATTGAAATAAATCTAAATGAAACTTTAGCCTTGTTTATGGAAGAGGCGGAAGAGCATTTATCGA
CAATTAATCAGTTCTTAAATCAAGAACTACATCAGTATGATAGCTACAATGCTTTAATACGTGCTCTACACACTTTGCGT
GGCAGTTCTGCAATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACTAAAGTTGAGCACTTATTTAAAATCTTATTGCA
AGAGGAGCTTTCTTCTAATTCAGATGAGATTTTATTATTACAAGAATATCGTGAGTTTATTGGCGAGAGCTTAGAACTGC
TATCTAGCAATAGTTCAAGTGAACAGCTTGAAGCGAGATTGGCGCAGTTTAATCAATCATGGGATGCCTACGTGGAGCAA
CATGGTGATCGAACTGATCCATTAATGCCTTCACATGGTTTGGTGTCGCAATTATTGCTGCTAGATGTTTCTGAGTTACT
AGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAACGAGTTTCCTGGTTATCTTGAACGTCTAAGTGAACAGGCTGATC
TGTTGCTACAGCATACTCACTCTCAAGCAATGCTTGGTTTGCATGAATATACGAGCCAATTGAAAGACAGCTATAATGTA
TTGCTTGATAAACCTGTCTTGTTGCAATCAGACTATATTTTTGAAATTTATCAGAAAGCGCATCAACAACTTATTCAATT
GTTCGATGCTTTAGCTGCTGGTCAGCGAGTCGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CGTTACATACGCCGAGTATTCAAAACGATTTACCTCATCAGAATTTTACTTTTGATGAGCCACTATTCAATACTGAACTA
GAACCAGAAGTTATTACGGTAGAGAATTTATCAGATTCTGCTGACTGGACAGTATTAAGCCAGAGTGTACAGCAAGATCG
TCAGTATATTTCATCTGCACAGGTAAATCGAAACTTTGATCCTGACCTTTTGGACATTTTTCTTGAAGAAGCTGATGAGC
TACTTGAGGGGATTGATACTGATCTCAATATATGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAACTTAATGCGT
TATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCGACTTATATCGGTTCGATTACCCATGAATTAGAAAGCAT
ATATGAGCGTTTAATTCAAAAGCAGTTAATTGCAACTTCACCTCTAATTGATTTTATTCGTTTGATTCAAGATGACTTGG
CCGATCGTCTACAAATCATGCGTGAAAAACAGCTAGATTATGCGGCTCCTTACACAATTAATGCGTTAAAACAAGCGGGT
AAAAACTCTAACTTCCAACCTGTGCCTGAGGTTGAAGTATTTGATACTGAAAGTGAGATATTCTCTGAACAAGAGGTGGT
GTCTCAAGTATTAATAAATGAGGTACCAGCGGAAACAGAAGTTGTTGTTGACGAATTAGAAGCTCATCACGATCAAGTAT
TTGATACCGTTGTTACTGAATTGGCTACGCCAGTTGAAGTAATAACATCAGTTGAATCCTCGCAAGAGAATGAAGCTGTA
GTTGACGAAGAAGATATTACCGTTGTTGTTGAGCAGACATTCCTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGATGT
GCTGTTGAAACAATGGTTTGATCAGCGTACGAACCGTAGTATCTTGCTTCAGTTACAAAGAGCCGTGCACAGTTTGAAGG
GTGGTGCACGCATGGTCGGTTTAGAGGCCGTGTATGCAATTGCTTATCAATTGGAAAATACTTTTGAACAGTTTGCACTA
CATCACTTCAACTCGAATATTTATGACCATCTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCAATTTTCAAGCACAA
CTACCAGCATTTCGATGGACTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCAGCGAAGT
TAACAAAAGCTGATTTGTTTAGCTCAGAACCTGTGATGACCTTTATACAAGGTGATGGTACCGAACCACCACCAATGATG
GGAGTATGGGAGCAAACAGAACGTCTGGATCAAAATAATGAAATGATCCGAGTTTCAGCAGACTTAATCGAGAAGATGAT
TGATTTATCTGGTGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATCTAAGTCAGTTTGGTCATACATTGGTTGAAA
TGGAATTGGCTATTCAACGACTTGCCGATCAGTTACGTCGAATGGAAGGCGAGTTAGAAACACAAATTATTGCCAAACAT
GGTATTGAGCATTCTCGTTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAATCAGTTATCGAAATC
TCTTGCTGAATCTGCATCGGACTTAGTCGACTTTAAAAATACGTTGTCTCACAAGATCAGAGATACAGAAAGTCTGCTTT
TACAACAGTCACGAATTCAGGCAGAAATTCAAGAAGGTTTGATGCGAACACGATTAGTTCCATTTTCACGGTTACTACCA
CGTTTACAGCGAATTGTTCGTCAGACCTCTACTGCATTGAACAGACCTGCTGAGCTTTTTGTAAATAATACTGAAGGTGA
ACTAGACCGTAATATTTTAGAACGCTTGGTAACACCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGCTTAGAAG
ACAGAACACAACGTCAGCAAGCTAATAAACCTGAAGCTGGGCGTATTGAACTTAATATTCAACGTCAAGGTACAGATGTG
GTCGTTGTCTTTAGTGATGATGGACAAGGTATTGATGTAGAAAAAGTACGTCAAAAAGCACTGCTTGCGGGTCTGATCAA
ACCGGGACAGCACTTGGAACACCAAGATATTTTACAACTGATTTTCCATCCAGGTTTAAGTACCGCAGATCAGATCACTC
AAATCTCTGGGCGTGGTGTTGGACTCGATGTTGTACAAAGCGATATTAAGGCTCTAGGTGGACATGTTAGCGTAGACTCT
GTTTATGGTAAGGGAACAACATTTACTATTCGTGTACCGACTACGGTAGCTGTAAGTGATGCCTTAATGGTGAAAGTGGC
AGATCAGCAATTTGCGATTCCACTTGCTCAAATTGATCGAATTGTTCGAGTTTCACCAGCTTCTTTAGAACAGTATTTTG
AAAGCCCTAAAGAACTATTCGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCAGAATTTGTGGGTAATCAACCA
ATGCCGCGTCTAAATGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCCAACAACGGCCAAACTGTAGCTTTACT
TGTTGACCAGTTAATTGGTTCTCGAGCACAAATTGTAGTGAAACCAATTGGCCAACAGTTCGCTAGCATTGGGGCAATTG
CAGGTGCGACTATTTTAGGTGATGGACAAGTTTGCTTAATTTTAGATGGACAAAATATTGCGCGACAAATTCAGTCTACT
CCGCGTCATAAACTGCTTGGTGAAGCAGTATATAGACAACGTGAATCTGACGAGCGCCGTCTCGTTATGATTGTCGATGA
TTCGGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCCAAAGATGGTGTGG
ATGCCATAGAGCAGCTAGAAAACATCAAGCCAGATCTAATGCTGCTTGATATTGAAATGCCGCGTATGGATGGTTTCGAA
GTACTGAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACGTCCCGAACAGGTGAAAAACA
TCGAGAACGAGCATTCTCATTAGGCGTAAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAATTACTAGAGAATATCG
ATGCTTTACTTGTAGCGTTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

91.241

100

0.913