Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   IC799_RS15230 Genome accession   NZ_CP061550
Coordinates   3294704..3295114 (-) Length   136 a.a.
NCBI ID   WP_039251138.1    Uniprot ID   A0A7H2V962
Organism   Acinetobacter seifertii strain AS79     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3289704..3300114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC799_RS15200 (IC799_15195) - 3289791..3290060 (-) 270 WP_019458135.1 HPr family phosphocarrier protein -
  IC799_RS15205 (IC799_15200) rapZ 3290057..3290908 (-) 852 WP_019458134.1 RNase adapter RapZ -
  IC799_RS15210 (IC799_15205) panC 3290931..3291779 (-) 849 WP_004698600.1 pantoate--beta-alanine ligase -
  IC799_RS15215 (IC799_15210) panB 3291783..3292592 (-) 810 WP_004698602.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  IC799_RS15220 (IC799_15215) folK 3292636..3293118 (-) 483 WP_191012634.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  IC799_RS15225 (IC799_15220) pcnB 3293115..3294578 (-) 1464 WP_068934874.1 polynucleotide adenylyltransferase PcnB -
  IC799_RS15230 (IC799_15225) comEA 3294704..3295114 (-) 411 WP_039251138.1 ComEA family DNA-binding protein Machinery gene
  IC799_RS15235 (IC799_15230) mazG 3295083..3295889 (-) 807 WP_191028646.1 nucleoside triphosphate pyrophosphohydrolase -
  IC799_RS15240 (IC799_15235) - 3296001..3296774 (+) 774 WP_191028647.1 SDR family oxidoreductase -
  IC799_RS15245 (IC799_15240) - 3296821..3299127 (-) 2307 WP_004698623.1 RelA/SpoT family protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15575.84 Da        Isoelectric Point: 10.3101

>NTDB_id=483093 IC799_RS15230 WP_039251138.1 3294704..3295114(-) (comEA) [Acinetobacter seifertii strain AS79]
MRYSMRIWKNNCFILMMLCLGVISPSVFAQSFDQNFQEWKAKQQMYDQKLNVSKPSHSYGSKNSYTKSSNDSTGQIHLNQ
ATVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=483093 IC799_RS15230 WP_039251138.1 3294704..3295114(-) (comEA) [Acinetobacter seifertii strain AS79]
ATGCGATACAGCATGAGAATTTGGAAAAATAATTGTTTTATTTTAATGATGTTGTGCTTAGGCGTAATTTCACCTTCGGT
TTTTGCTCAATCTTTTGATCAAAACTTTCAGGAATGGAAGGCTAAACAGCAGATGTACGACCAAAAGTTAAACGTCTCTA
AGCCTTCTCATTCATATGGTTCTAAAAATTCTTATACTAAGAGTTCTAATGATTCTACAGGGCAAATTCACTTGAATCAG
GCCACTGTAAATGAGTTTCAGCAGTTAAAAGGCGTAGGTGAGAAAAAGGCGCAAGCGATTGTAGAATATAGACAGAAGAA
CGGAAGTTTTAAAAATATTGACGAAATTAAAAACGTCAAAGGAATCGGCCCCGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H2V962

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

88.235

100

0.882
  comEA Acinetobacter baumannii D1279779

86.765

100

0.868
  comEA Acinetobacter baylyi ADP1

48.649

81.618

0.397