Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   IC799_RS01685 Genome accession   NZ_CP061550
Coordinates   361370..361930 (+) Length   186 a.a.
NCBI ID   WP_134262473.1    Uniprot ID   A0A5E9PJG2
Organism   Acinetobacter seifertii strain AS79     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 356370..366930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC799_RS01660 (IC799_01660) - 358513..358643 (-) 131 Protein_320 hypothetical protein -
  IC799_RS01665 (IC799_01665) rpoZ 358682..358960 (-) 279 WP_000135049.1 DNA-directed RNA polymerase subunit omega -
  IC799_RS01670 (IC799_01670) gmk 359033..359662 (-) 630 WP_039250522.1 guanylate kinase -
  IC799_RS01675 (IC799_01675) ispH 359785..360735 (+) 951 WP_004705229.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  IC799_RS01680 (IC799_01680) fimU 360903..361376 (+) 474 WP_134262475.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  IC799_RS01685 (IC799_01685) pilV 361370..361930 (+) 561 WP_134262473.1 type IV pilus modification protein PilV Machinery gene
  IC799_RS01690 (IC799_01690) pilW 361930..362928 (+) 999 WP_191012233.1 PilW family protein Machinery gene
  IC799_RS01695 (IC799_01695) pilX 362925..363740 (+) 816 WP_191012232.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene

Sequence

Protein


Download         Length: 186 a.a.        Molecular weight: 19936.17 Da        Isoelectric Point: 8.2190

>NTDB_id=483071 IC799_RS01685 WP_134262473.1 361370..361930(+) (pilV) [Acinetobacter seifertii strain AS79]
MLMQLKNLKAQEGAGLIEVLVALILLAIGVLGYVALQLKAMDASSEALTKSQAMIIMRGLAENIRVNSVQSGQYPALVRN
YSNFSSTTIAPTSCFNTACTPSQLAQFDAYQTAKNADQLGIKITMTNCPGVTSTMTLQRQCLFAFWGKTLPVMSTSGSTS
TVDVSNCITSSGIYVSNSKCLMMETY

Nucleotide


Download         Length: 561 bp        

>NTDB_id=483071 IC799_RS01685 WP_134262473.1 361370..361930(+) (pilV) [Acinetobacter seifertii strain AS79]
ATGTTAATGCAATTAAAAAATCTGAAAGCGCAAGAAGGGGCTGGACTAATAGAGGTTTTAGTTGCTTTGATTTTACTTGC
AATAGGAGTGCTTGGCTATGTCGCACTTCAGCTTAAGGCTATGGATGCATCCTCAGAAGCATTGACCAAGTCTCAGGCAA
TGATAATCATGAGAGGATTAGCCGAAAATATTCGTGTAAATAGTGTTCAATCTGGTCAATATCCAGCATTGGTTCGTAAT
TATAGTAATTTTTCATCGACTACAATTGCTCCGACTTCCTGCTTCAATACGGCTTGTACCCCTTCTCAACTTGCCCAATT
TGATGCGTATCAGACAGCAAAAAATGCAGATCAGTTGGGTATCAAAATTACAATGACAAATTGTCCAGGTGTGACGTCAA
CTATGACTTTACAAAGACAATGTTTATTCGCTTTTTGGGGAAAAACTTTACCTGTAATGAGTACAAGTGGGAGTACATCA
ACTGTAGATGTATCAAATTGCATCACTAGTAGTGGAATTTATGTCTCTAATTCTAAGTGTTTAATGATGGAGACATATTG
A

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5E9PJG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Acinetobacter baumannii D1279779

70.968

100

0.71
  pilV Acinetobacter baylyi ADP1

35.263

100

0.36