Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   J7U23_RS03930 Genome accession   NZ_CP072435
Coordinates   741422..741715 (+) Length   97 a.a.
NCBI ID   WP_087009817.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24736     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 736422..746715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U23_RS03910 (J7U23_03890) - 737548..738690 (+) 1143 WP_372589994.1 AbiH family protein -
  J7U23_RS03915 (J7U23_03895) - 738856..739563 (+) 708 WP_179971280.1 hypothetical protein -
  J7U23_RS03920 (J7U23_03900) - 739762..740898 (+) 1137 WP_372589995.1 restriction endonuclease subunit S -
  J7U23_RS03925 (J7U23_03905) - 741063..741432 (+) 370 Protein_713 type II toxin-antitoxin system RelE/ParE family toxin -
  J7U23_RS03930 (J7U23_03910) HI0659 741422..741715 (+) 294 WP_087009817.1 helix-turn-helix domain-containing protein Machinery gene
  J7U23_RS03935 (J7U23_03915) - 741737..743338 (+) 1602 WP_179971281.1 type I restriction-modification system subunit M -
  J7U23_RS03940 (J7U23_03920) - 743415..743837 (+) 423 Protein_716 PD-(D/E)XK nuclease family transposase -
  J7U23_RS03945 (J7U23_03925) - 743932..744936 (+) 1005 WP_179971282.1 DNA/RNA non-specific endonuclease -
  J7U23_RS03950 (J7U23_03930) - 745086..745646 (+) 561 WP_096811368.1 LemA family protein -
  J7U23_RS03955 (J7U23_03935) htpX 745648..746547 (+) 900 WP_164178021.1 zinc metalloprotease HtpX -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10758.49 Da        Isoelectric Point: 5.8962

>NTDB_id=482770 J7U23_RS03930 WP_087009817.1 741422..741715(+) (HI0659) [Streptococcus thermophilus strain S24736]
MKNSAIGSNWKDVRAELFTKEEILESDLRVAIMTELIEARHEKGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQERV

Nucleotide


Download         Length: 294 bp        

>NTDB_id=482770 J7U23_RS03930 WP_087009817.1 741422..741715(+) (HI0659) [Streptococcus thermophilus strain S24736]
ATGAAGAATAGTGCCATCGGTAGCAATTGGAAAGATGTGAGAGCAGAGCTCTTCACCAAGGAAGAAATCCTGGAAAGTGA
TTTACGGGTCGCGATTATGACTGAGCTGATCGAGGCTCGACACGAAAAGGGCATTAGCCAAAAGAAACTAGAAGAACTCA
GTGGGGTCAGTCAACCGGTCATCGCTCGGATGGAGACAGGAAAGACCAGTCCTCAATTGGATACAGTTTTGAAAGTCTTA
GCTAGTCTGGGCAAGACTCTCGCTGTCGTCCCACTGGAACAAGAAAGGGTCTAA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

60.44

93.814

0.567