Detailed information NTG0482687

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: J7T96_RS06885
• Genome accession: NZ_CP072434
• Coordinates: 1316092..1317018 (-)
• Length: 308 a.a.
• NCBI ID: WP_064355560.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24742
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1311092..1322018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T96_RS06855 (J7T96_06735)	-	1311170..1311964 (-)	795	WP_084829753.1	HAD-IIB family hydrolase	-
J7T96_RS06860 (J7T96_06740)	-	1312148..1312525 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
J7T96_RS06865 (J7T96_06745)	-	1312530..1313228 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
J7T96_RS06870 (J7T96_06750)	-	1313240..1314025 (+)	786	WP_207559818.1	ABC transporter permease	-
J7T96_RS06875 (J7T96_06755)	-	1314075..1315004 (-)	930	WP_011681415.1	ATP-binding cassette domain-containing protein	-
J7T96_RS06880 (J7T96_06760)	amiE	1314997..1316082 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
J7T96_RS06885 (J7T96_06765)	amiD	1316092..1317018 (-)	927	WP_064355560.1	oligopeptide ABC transporter permease OppC	Regulator
J7T96_RS06890 (J7T96_06770)	amiC	1317018..1318511 (-)	1494	WP_064355564.1	ABC transporter permease	Regulator
J7T96_RS06895 (J7T96_06775)	amiA3	1318572..1320545 (-)	1974	WP_101415657.1	peptide ABC transporter substrate-binding protein	Regulator
J7T96_RS06900 (J7T96_06780)	-	1320851..1321998 (+)	1148	WP_095559415.1	IS3 family transposase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34650.80 Da
• Isoelectric Point: 9.7054

>NTDB_id=482687 J7T96_RS06885 WP_064355560.1 1316092..1317018(-) (amiD) [Streptococcus thermophilus strain S24742]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=482687 J7T96_RS06885 WP_064355560.1 1316092..1317018(-) (amiD) [Streptococcus thermophilus strain S24742]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGATTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.351	100	0.994
amiD	Streptococcus thermophilus LMD-9	99.351	100	0.994
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964