Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ICG51_RS04545 Genome accession   NZ_CP061497
Coordinates   948108..948509 (-) Length   133 a.a.
NCBI ID   WP_190281840.1    Uniprot ID   -
Organism   Thermomonas sp. XSG     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 943108..953509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICG51_RS04530 (ICG51_000907) - 944895..946910 (-) 2016 WP_190281838.1 methyl-accepting chemotaxis protein -
  ICG51_RS04535 (ICG51_000908) - 946944..947525 (-) 582 WP_190282354.1 chemotaxis protein CheW -
  ICG51_RS04540 (ICG51_000909) - 947724..948089 (-) 366 WP_190281839.1 response regulator -
  ICG51_RS04545 (ICG51_000910) pilG 948108..948509 (-) 402 WP_190281840.1 twitching motility response regulator PilG Regulator
  ICG51_RS04550 (ICG51_000911) gshB 948668..949630 (+) 963 WP_190281841.1 glutathione synthase -
  ICG51_RS04555 (ICG51_000912) - 949630..950517 (+) 888 WP_190281842.1 energy transducer TonB -
  ICG51_RS04560 (ICG51_000913) - 950542..951030 (-) 489 WP_190281843.1 hypothetical protein -
  ICG51_RS04565 (ICG51_000914) tsaB 951076..951783 (-) 708 WP_190281844.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14678.96 Da        Isoelectric Point: 6.9527

>NTDB_id=482590 ICG51_RS04545 WP_190281840.1 948108..948509(-) (pilG) [Thermomonas sp. XSG]
MAPQDDSGIGLKGLRVMVIDDSRTIRRTAETLLAREGCDVVTATDGFEALSKIADHAPQIIFVDIMMPRLDGYQTCALIK
NNQTFKSVPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=482590 ICG51_RS04545 WP_190281840.1 948108..948509(-) (pilG) [Thermomonas sp. XSG]
ATGGCGCCGCAGGACGATTCCGGCATCGGCCTCAAGGGTTTGAGGGTGATGGTCATCGACGATTCCAGGACCATCCGCCG
CACGGCGGAGACCTTGCTCGCGCGCGAGGGTTGCGACGTCGTCACCGCGACCGACGGCTTCGAGGCGCTGTCCAAGATCG
CCGACCATGCGCCGCAGATCATCTTCGTGGATATCATGATGCCGCGGCTGGACGGCTATCAGACCTGTGCGCTGATCAAG
AACAACCAGACGTTCAAAAGCGTGCCGGTGATCATGCTTTCGTCGAAGGACGGTTTGTTCGACAAGGCGCGAGGCCGTAT
CGTCGGCTCCGAGCAATACCTGACCAAGCCGTTCACGCGGGAAGAACTGCTTGGCGCCATCCGTACGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.581

93.233

0.677