Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   J7U07_RS05305 Genome accession   NZ_CP072433
Coordinates   1006098..1006580 (-) Length   160 a.a.
NCBI ID   WP_082308976.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24743     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1001098..1011580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U07_RS05285 (J7U07_05195) pepT 1001579..1002802 (-) 1224 WP_014608366.1 peptidase T -
  J7U07_RS05290 (J7U07_05200) lepB 1003010..1003567 (-) 558 WP_011681191.1 signal peptidase I -
  J7U07_RS05295 (J7U07_05205) - 1003690..1004919 (-) 1230 WP_002953086.1 lipopolysaccharide assembly protein LapB -
  J7U07_RS05300 (J7U07_05210) - 1004909..1006087 (-) 1179 WP_207559802.1 AI-2E family transporter -
  J7U07_RS05305 (J7U07_05215) mutX 1006098..1006580 (-) 483 WP_082308976.1 8-oxo-dGTP diphosphatase Machinery gene
  J7U07_RS05310 (J7U07_05220) ftsX 1006736..1007665 (-) 930 WP_084829635.1 permease-like cell division protein FtsX -
  J7U07_RS05315 (J7U07_05225) ftsE 1007658..1008350 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  J7U07_RS05325 (J7U07_05235) queG 1009589..1010707 (-) 1119 WP_084829636.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18842.29 Da        Isoelectric Point: 4.6250

>NTDB_id=482569 J7U07_RS05305 WP_082308976.1 1006098..1006580(-) (mutX) [Streptococcus thermophilus strain S24743]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDT

Nucleotide


Download         Length: 483 bp        

>NTDB_id=482569 J7U07_RS05305 WP_082308976.1 1006098..1006580(-) (mutX) [Streptococcus thermophilus strain S24743]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTTCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATACA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706