Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | IC803_RS04695 | Genome accession | NZ_CP061474 |
| Coordinates | 917728..918798 (+) | Length | 356 a.a. |
| NCBI ID | WP_190304293.1 | Uniprot ID | - |
| Organism | Geobacillus sp. 46C-IIa | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 912728..923798
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC803_RS04665 (IC803_04665) | - | 912849..914012 (+) | 1164 | WP_081209506.1 | M14 family metallopeptidase | - |
| IC803_RS04670 (IC803_04670) | - | 914048..914224 (-) | 177 | WP_081209504.1 | DUF2759 domain-containing protein | - |
| IC803_RS04675 (IC803_04675) | - | 914405..915037 (+) | 633 | WP_081209502.1 | MBL fold metallo-hydrolase | - |
| IC803_RS04680 (IC803_04680) | - | 915268..916395 (+) | 1128 | WP_081209500.1 | class I SAM-dependent methyltransferase | - |
| IC803_RS04685 (IC803_04685) | - | 916426..916668 (-) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| IC803_RS04690 (IC803_04690) | - | 916830..917528 (-) | 699 | WP_081209498.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| IC803_RS04695 (IC803_04695) | comGA | 917728..918798 (+) | 1071 | WP_190304293.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IC803_RS04700 (IC803_04700) | comGB | 918795..919823 (+) | 1029 | WP_081209494.1 | competence type IV pilus assembly protein ComGB | - |
| IC803_RS04705 (IC803_04705) | comGC | 919887..920183 (+) | 297 | WP_081209492.1 | competence type IV pilus major pilin ComGC | - |
| IC803_RS04710 (IC803_04710) | comGD | 920167..920610 (+) | 444 | WP_223812022.1 | competence type IV pilus minor pilin ComGD | - |
| IC803_RS04715 (IC803_04715) | - | 920594..920920 (+) | 327 | WP_081209490.1 | competence protein ComG | - |
| IC803_RS04720 (IC803_04720) | comGF | 920899..921342 (+) | 444 | WP_081209488.1 | competence type IV pilus minor pilin ComGF | - |
| IC803_RS04725 (IC803_04725) | comGG | 921473..921862 (+) | 390 | WP_081209486.1 | competence type IV pilus minor pilin ComGG | - |
| IC803_RS04730 (IC803_04730) | - | 921908..922087 (+) | 180 | WP_081209484.1 | YqzE family protein | - |
| IC803_RS04735 (IC803_04735) | - | 922163..922957 (-) | 795 | WP_081209482.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 39588.86 Da Isoelectric Point: 9.2159
>NTDB_id=482558 IC803_RS04695 WP_190304293.1 917728..918798(+) (comGA) [Geobacillus sp. 46C-IIa]
MDDIEQVANRLLAEAVQRRASDLHLVPRRHDAAIRLRLDGMLTDVGTLPKETAERVIVHFKFLAGMDIGERRRPQSGAME
VNESGETVYLRLSTLPTLYDESLVIRLLPQRFSLPLRELSLFPQSTARLFSFMQQPQGLVLLTGPTGSGKTTTLYTLLDV
CQAERQRNIITLEDPIEKRNDRFLQVQINEKAGITYAASLKAALRHDPDVLMVGEIRDHDTAAIAVRSALTGHLVVSTMH
AADAVGAVYRLHEFGVPPGDLAETLLAVSAQRLVELCCPLCGDDCHPACRRLRRRRRAAVHELLYGPALLDAIRSLSDGD
GRRLRRHMTLARLIRKGIALGYLPVRALRLVGGEGR
MDDIEQVANRLLAEAVQRRASDLHLVPRRHDAAIRLRLDGMLTDVGTLPKETAERVIVHFKFLAGMDIGERRRPQSGAME
VNESGETVYLRLSTLPTLYDESLVIRLLPQRFSLPLRELSLFPQSTARLFSFMQQPQGLVLLTGPTGSGKTTTLYTLLDV
CQAERQRNIITLEDPIEKRNDRFLQVQINEKAGITYAASLKAALRHDPDVLMVGEIRDHDTAAIAVRSALTGHLVVSTMH
AADAVGAVYRLHEFGVPPGDLAETLLAVSAQRLVELCCPLCGDDCHPACRRLRRRRRAAVHELLYGPALLDAIRSLSDGD
GRRLRRHMTLARLIRKGIALGYLPVRALRLVGGEGR
Nucleotide
Download Length: 1071 bp
>NTDB_id=482558 IC803_RS04695 WP_190304293.1 917728..918798(+) (comGA) [Geobacillus sp. 46C-IIa]
CTGGATGATATTGAACAAGTAGCGAACCGTCTCCTTGCTGAAGCGGTGCAGCGCCGCGCCTCTGACCTTCACCTCGTCCC
GCGCCGCCATGATGCGGCCATTCGCCTCCGTCTTGACGGCATGCTCACCGATGTTGGCACGCTCCCGAAAGAAACCGCTG
AACGCGTCATCGTCCATTTCAAGTTTCTAGCCGGCATGGATATCGGCGAACGCCGCCGACCGCAAAGCGGCGCGATGGAA
GTGAATGAGTCCGGGGAAACGGTGTATTTGCGCTTATCGACGCTGCCGACGCTTTACGATGAAAGCCTCGTCATCCGCCT
TCTGCCGCAGCGCTTTTCGCTGCCGCTTCGCGAACTATCCTTATTTCCTCAATCCACCGCACGGTTGTTTTCCTTTATGC
AGCAGCCGCAAGGGCTCGTACTGTTGACCGGACCGACCGGGTCGGGAAAGACGACGACATTGTATACGCTTCTTGACGTT
TGCCAAGCGGAAAGACAACGCAACATCATCACGCTGGAAGATCCGATCGAAAAACGGAATGACCGGTTTTTGCAAGTGCA
GATCAATGAAAAAGCGGGCATCACGTATGCGGCGAGTTTGAAAGCCGCTTTGCGCCATGACCCTGACGTGTTAATGGTCG
GCGAGATCCGCGACCATGATACGGCGGCGATCGCCGTGCGATCGGCGTTAACTGGACATTTAGTCGTGTCGACCATGCAT
GCTGCCGATGCGGTCGGCGCGGTGTACCGGCTGCATGAGTTCGGGGTGCCGCCCGGCGATTTAGCGGAGACGTTGCTCGC
CGTTTCGGCGCAGCGTCTCGTTGAACTGTGCTGTCCGCTATGCGGCGACGATTGCCATCCGGCGTGTCGCCGGCTTCGAC
GCAGACGGCGCGCTGCCGTCCATGAACTGCTTTACGGCCCGGCGCTTCTTGATGCCATCCGTTCACTGTCGGACGGAGAC
GGGCGACGGCTCCGCCGCCATATGACATTAGCCCGCCTCATCCGTAAAGGAATCGCGCTCGGTTATTTGCCGGTCCGCGC
GCTTAGACTTGTCGGAGGGGAAGGACGATGA
CTGGATGATATTGAACAAGTAGCGAACCGTCTCCTTGCTGAAGCGGTGCAGCGCCGCGCCTCTGACCTTCACCTCGTCCC
GCGCCGCCATGATGCGGCCATTCGCCTCCGTCTTGACGGCATGCTCACCGATGTTGGCACGCTCCCGAAAGAAACCGCTG
AACGCGTCATCGTCCATTTCAAGTTTCTAGCCGGCATGGATATCGGCGAACGCCGCCGACCGCAAAGCGGCGCGATGGAA
GTGAATGAGTCCGGGGAAACGGTGTATTTGCGCTTATCGACGCTGCCGACGCTTTACGATGAAAGCCTCGTCATCCGCCT
TCTGCCGCAGCGCTTTTCGCTGCCGCTTCGCGAACTATCCTTATTTCCTCAATCCACCGCACGGTTGTTTTCCTTTATGC
AGCAGCCGCAAGGGCTCGTACTGTTGACCGGACCGACCGGGTCGGGAAAGACGACGACATTGTATACGCTTCTTGACGTT
TGCCAAGCGGAAAGACAACGCAACATCATCACGCTGGAAGATCCGATCGAAAAACGGAATGACCGGTTTTTGCAAGTGCA
GATCAATGAAAAAGCGGGCATCACGTATGCGGCGAGTTTGAAAGCCGCTTTGCGCCATGACCCTGACGTGTTAATGGTCG
GCGAGATCCGCGACCATGATACGGCGGCGATCGCCGTGCGATCGGCGTTAACTGGACATTTAGTCGTGTCGACCATGCAT
GCTGCCGATGCGGTCGGCGCGGTGTACCGGCTGCATGAGTTCGGGGTGCCGCCCGGCGATTTAGCGGAGACGTTGCTCGC
CGTTTCGGCGCAGCGTCTCGTTGAACTGTGCTGTCCGCTATGCGGCGACGATTGCCATCCGGCGTGTCGCCGGCTTCGAC
GCAGACGGCGCGCTGCCGTCCATGAACTGCTTTACGGCCCGGCGCTTCTTGATGCCATCCGTTCACTGTCGGACGGAGAC
GGGCGACGGCTCCGCCGCCATATGACATTAGCCCGCCTCATCCGTAAAGGAATCGCGCTCGGTTATTTGCCGGTCCGCGC
GCTTAGACTTGTCGGAGGGGAAGGACGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
51.594 |
96.91 |
0.5 |