Detailed information NTG0482391

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: J7T77_RS06805
• Genome accession: NZ_CP072430
• Coordinates: 1305383..1306309 (-)
• Length: 308 a.a.
• NCBI ID: WP_002946409.1
• Uniprot ID: Q5M3H5
• Organism: Streptococcus thermophilus strain S24746
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1300383..1311309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T77_RS06775 (J7T77_06660)	-	1300462..1301256 (-)	795	WP_011681412.1	HAD-IIB family hydrolase	-
J7T77_RS06780 (J7T77_06665)	-	1301440..1301817 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
J7T77_RS06785 (J7T77_06670)	-	1301822..1302520 (+)	699	WP_014608540.1	ABC transporter ATP-binding protein	-
J7T77_RS06790 (J7T77_06675)	-	1302532..1303316 (+)	785	Protein_1283	ABC transporter permease	-
J7T77_RS06795 (J7T77_06680)	-	1303366..1304295 (-)	930	WP_011681415.1	ATP-binding cassette domain-containing protein	-
J7T77_RS06800 (J7T77_06685)	amiE	1304288..1305373 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
J7T77_RS06805 (J7T77_06690)	amiD	1305383..1306309 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
J7T77_RS06810 (J7T77_06695)	amiC	1306309..1307802 (-)	1494	WP_179970628.1	ABC transporter permease	Regulator
J7T77_RS06815 (J7T77_06700)	amiA3	1307863..1309836 (-)	1974	WP_372589652.1	peptide ABC transporter substrate-binding protein	Regulator
J7T77_RS06820 (J7T77_06705)	-	1310073..1310263 (-)	191	Protein_1289	IS3 family transposase	-
J7T77_RS06825	-	1310257..1310667 (-)	411	Protein_1290	ATP-binding cassette domain-containing protein	-
J7T77_RS06830 (J7T77_06720)	-	1310699..1311013 (-)	315	Protein_1291	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34694.85 Da
• Isoelectric Point: 9.7054

>NTDB_id=482391 J7T77_RS06805 WP_002946409.1 1305383..1306309(-) (amiD) [Streptococcus thermophilus strain S24746]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=482391 J7T77_RS06805 WP_002946409.1 1305383..1306309(-) (amiD) [Streptococcus thermophilus strain S24746]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTACTATTA
TTTTAATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterProScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

3D structure

• AlphaFold DB: Q5M3H5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	100	100	1
amiD	Streptococcus thermophilus LMD-9	100	100	1
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964