Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   J7T92_RS08050 Genome accession   NZ_CP072429
Coordinates   1533393..1534196 (+) Length   267 a.a.
NCBI ID   WP_223899638.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24747     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1528393..1539196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T92_RS08020 (J7T92_07995) - 1529000..1529254 (-) 255 WP_014608660.1 Blp family class II bacteriocin -
  J7T92_RS08025 - 1529505..1529906 (-) 402 WP_024703992.1 hypothetical protein -
  J7T92_RS08030 (J7T92_08000) - 1530893..1531123 (-) 231 WP_260223024.1 bacteriocin class II family protein -
  J7T92_RS08035 (J7T92_08005) - 1531479..1531679 (-) 201 WP_011681569.1 hypothetical protein -
  J7T92_RS08040 (J7T92_08010) - 1531698..1531874 (-) 177 WP_011681570.1 Blp family class II bacteriocin -
  J7T92_RS08045 (J7T92_08015) - 1532125..1532862 (+) 738 WP_011681571.1 LytTR family DNA-binding domain-containing protein -
  J7T92_RS08050 comD/blpH 1533393..1534196 (+) 804 WP_223899638.1 ATP-binding protein Regulator
  J7T92_RS08055 (J7T92_08025) - 1534214..1534375 (-) 162 WP_011681573.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  J7T92_RS08060 (J7T92_08030) comB 1534390..1535757 (-) 1368 WP_011681574.1 bacteriocin secretion accessory protein Regulator
  J7T92_RS08065 (J7T92_08035) - 1535773..1537925 (-) 2153 Protein_1536 peptide cleavage/export ABC transporter -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30641.92 Da        Isoelectric Point: 4.7379

>NTDB_id=482304 J7T92_RS08050 WP_223899638.1 1533393..1534196(+) (comD/blpH) [Streptococcus thermophilus strain S24747]
MYLENTTHSSTLELRKLCVVISLVLFFIMIVFLDRNIREMIQGQLDFQKNLQLENLYTYNKHIEGLYNSVRSFRHDYSNL
LVTLRLGIDKDDMDIVKEAYDSVLQESDKRLNTRNFDLARLVNIQDNTLKSLLSAKVLQAEEEGIEAQISIPEPIHLIGM
ETLDFIIVTSIFLDNAIEGAIQTQNPKITISFWEDHCSQLLSISNTISEEKTETKTIFERGVSNKGRERGIGLANVTEIL
DNYINVNLETQSNNFSFTQQLTITKKA

Nucleotide


Download         Length: 804 bp        

>NTDB_id=482304 J7T92_RS08050 WP_223899638.1 1533393..1534196(+) (comD/blpH) [Streptococcus thermophilus strain S24747]
ATGTATCTTGAAAACACTACTCATTCTTCAACTTTGGAGCTTCGAAAACTCTGTGTTGTTATTTCACTTGTCCTCTTCTT
CATTATGATTGTCTTTTTAGACAGAAACATTCGTGAAATGATTCAAGGACAATTGGACTTCCAAAAAAATCTCCAGCTAG
AAAATCTCTACACCTACAATAAACATATTGAAGGTCTCTACAATTCTGTTCGTAGTTTTAGACACGATTATAGTAATCTC
TTAGTCACATTACGATTGGGGATAGATAAAGACGATATGGATATTGTCAAAGAAGCCTATGATAGTGTGCTTCAAGAATC
CGATAAACGATTAAATACAAGAAACTTTGACTTAGCTAGACTCGTTAATATTCAGGATAACACTTTGAAAAGCCTTCTGT
CCGCAAAAGTTTTACAAGCAGAAGAAGAAGGTATTGAAGCTCAGATTAGCATCCCAGAACCCATCCACTTGATTGGGATG
GAGACTCTGGACTTCATTATCGTCACTTCTATTTTTTTAGATAACGCTATTGAAGGTGCCATTCAAACTCAAAACCCTAA
AATTACTATTAGCTTTTGGGAAGATCATTGTTCACAGCTATTATCTATTAGCAATACCATAAGTGAAGAAAAAACAGAAA
CCAAAACCATATTTGAAAGAGGTGTCTCCAACAAGGGACGAGAGCGAGGCATTGGCCTTGCTAATGTCACAGAAATCTTA
GATAACTATATCAATGTAAACTTAGAAACACAGAGTAACAATTTCTCATTCACACAACAATTAACAATAACTAAAAAGGC
CTAA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(160-263)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

38.189

95.131

0.363