Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   IC588_RS13380 Genome accession   NZ_CP061349
Coordinates   2691153..2692040 (-) Length   295 a.a.
NCBI ID   WP_196584246.1    Uniprot ID   -
Organism   Staphylococcus aureus strain MSSA01     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2686153..2697040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC588_RS13350 (IC588_13350) - 2686172..2686264 (+) 93 WP_010956583.1 hypothetical protein -
  IC588_RS13355 (IC588_13355) - 2686372..2686869 (-) 498 WP_001065268.1 glutathione peroxidase -
  IC588_RS13360 (IC588_13360) - 2686879..2687139 (-) 261 WP_196584245.1 hypothetical protein -
  IC588_RS13365 (IC588_13365) - 2687521..2687634 (-) 114 Protein_2606 hypothetical protein -
  IC588_RS13370 (IC588_13370) - 2688293..2690293 (-) 2001 WP_000776740.1 ABC transporter permease -
  IC588_RS13375 (IC588_13375) - 2690290..2691045 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  IC588_RS13380 (IC588_13380) braS 2691153..2692040 (-) 888 WP_196584246.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  IC588_RS13385 (IC588_13385) braR 2692051..2692716 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  IC588_RS13390 (IC588_13390) - 2692742..2692942 (-) 201 WP_000604727.1 hypothetical protein -
  IC588_RS13395 (IC588_13395) - 2693140..2694563 (+) 1424 Protein_2612 alkaline phosphatase -
  IC588_RS14030 - 2694623..2694724 (-) 102 WP_000731972.1 SE2200 family small protein -
  IC588_RS13405 (IC588_13405) - 2694846..2695301 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  IC588_RS13410 (IC588_13410) - 2695546..2696307 (-) 762 WP_000323441.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34001.20 Da        Isoelectric Point: 5.8962

>NTDB_id=482054 IC588_RS13380 WP_196584246.1 2691153..2692040(-) (braS) [Staphylococcus aureus strain MSSA01]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKSLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLLIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=482054 IC588_RS13380 WP_196584246.1 2691153..2692040(-) (braS) [Staphylococcus aureus strain MSSA01]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTCATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTACTGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.644

100

0.986