Detailed information NTG0481868

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: D8K17_RS11895
• Genome accession: NZ_CP061322
• Coordinates: 2333497..2334525 (-)
• Length: 342 a.a.
• NCBI ID: WP_010906347.1
• Uniprot ID: A0AAP4JQE3
• Organism: Lactococcus lactis subsp. lactis bv. diacetylactis strain S50
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2328497..2339525

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D8K17_RS11870 (D8K17_011895)	-	2328783..2329280 (-)	498	WP_021214977.1	nitroreductase family protein	-
D8K17_RS11875 (D8K17_011900)	-	2329267..2329476 (-)	210	WP_003132661.1	hypothetical protein	-
D8K17_RS11880 (D8K17_011905)	-	2329473..2330300 (-)	828	WP_010906344.1	radical SAM protein	-
D8K17_RS11885 (D8K17_011910)	-	2330293..2332416 (-)	2124	WP_010906345.1	radical SAM protein	-
D8K17_RS11890 (D8K17_011915)	-	2332519..2333376 (-)	858	WP_010906346.1	transcriptional regulator	-
D8K17_RS11895 (D8K17_011920)	sepM	2333497..2334525 (-)	1029	WP_010906347.1	SepM family pheromone-processing serine protease	Regulator
D8K17_RS11900 (D8K17_011925)	coaD	2334512..2335009 (-)	498	WP_010906348.1	pantetheine-phosphate adenylyltransferase	-
D8K17_RS11905 (D8K17_011930)	rsmD	2335057..2335596 (-)	540	WP_015427191.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
D8K17_RS11910 (D8K17_011935)	-	2335767..2336987 (-)	1221	WP_003132654.1	MFS transporter	-
D8K17_RS11915 (D8K17_011940)	lmrP	2337071..2338297 (-)	1227	WP_021214981.1	multidrug efflux MFS transporter LmrP	-
D8K17_RS11920 (D8K17_011945)	-	2338485..2338979 (+)	495	WP_010906351.1	RNA polymerase sigma factor	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37379.98 Da
• Isoelectric Point: 9.9183

>NTDB_id=481868 D8K17_RS11895 WP_010906347.1 2333497..2334525(-) (sepM) [Lactococcus lactis subsp. lactis bv. diacetylactis strain S50]
MKKNKKINPKLKWGISIGLIVVALLALFYPTSYYVEMPGTTEPLGKMVKVEGKKDEHKGDFFLTTVQIARANLATMIYSH
FNSFTSIYSEQEMTGGLNDAQFNRVNQFYMETAQNTAIYQAFKLANKPYELKYEGVYVLDIAKNSTFKNKLELADTITAV
NGQQFTSSADMIAYVSKQKVGDSVTIEYTRIDGTKHKSTGKYIKIANGKTGIGISLVDHTEVVTTPKVTVNAGSIGGPSA
GMMFTLEIYSQLTGKDLRNGREIAGTGTIEHDGSIGQIGGVDKKVATASKEGAKVFLVPDSGTKKESSNNYLGAKTAAKK
LKTKMKIVPVKTIQDALDYLEK

Nucleotide

• Length: 1029 bp

>NTDB_id=481868 D8K17_RS11895 WP_010906347.1 2333497..2334525(-) (sepM) [Lactococcus lactis subsp. lactis bv. diacetylactis strain S50]
ATGAAAAAAAATAAAAAAATTAATCCCAAATTAAAATGGGGAATCTCGATTGGTCTAATTGTTGTTGCCCTTTTAGCTTT
ATTTTATCCAACGAGTTACTATGTGGAAATGCCCGGAACAACCGAGCCTTTAGGGAAAATGGTCAAAGTTGAAGGCAAAA
AAGATGAACATAAAGGTGATTTTTTCCTGACGACTGTCCAAATTGCACGAGCAAATCTTGCTACAATGATTTACAGCCAT
TTTAATAGTTTTACAAGCATTTACAGTGAGCAAGAAATGACTGGTGGACTTAACGACGCACAGTTCAACCGTGTCAACCA
GTTTTACATGGAAACGGCACAGAATACAGCGATTTATCAAGCTTTTAAATTAGCTAATAAACCTTATGAACTTAAATATG
AAGGCGTTTATGTCCTTGATATTGCCAAAAATTCGACCTTTAAAAATAAGCTAGAACTTGCAGATACGATTACAGCAGTC
AATGGTCAACAGTTTACATCAAGTGCCGACATGATTGCTTATGTTTCCAAACAAAAAGTCGGTGATTCAGTAACGATTGA
ATACACGAGAATTGACGGCACAAAGCACAAGTCAACTGGCAAATACATCAAAATTGCTAATGGAAAAACAGGAATTGGGA
TCAGCCTAGTTGACCATACTGAAGTCGTGACGACTCCAAAAGTTACTGTCAACGCGGGTTCAATCGGTGGTCCCTCTGCG
GGGATGATGTTTACACTAGAAATTTACAGTCAGTTGACAGGAAAAGATTTGCGAAACGGTCGCGAAATTGCTGGAACTGG
AACGATTGAACATGACGGAAGCATTGGCCAAATCGGCGGTGTTGATAAAAAAGTAGCCACAGCGAGCAAAGAAGGGGCAA
AGGTCTTCTTAGTGCCTGACTCAGGCACCAAAAAGGAAAGCAGCAACAATTACCTTGGAGCCAAAACCGCAGCTAAAAAA
CTAAAAACGAAGATGAAAATCGTTCCCGTCAAAACTATTCAGGACGCTTTAGATTATTTAGAAAAATAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (134-194)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (227-338)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	48.696	100	0.491