Detailed information NTG0481765

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: C2747_RS09675
• Genome accession: NZ_CP061314
• Coordinates: 1885336..1886226 (+)
• Length: 296 a.a.
• NCBI ID: WP_215331599.1
• Uniprot ID: -
• Organism: Polynucleobacter corsicus strain AP-Melu-1000-A1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1880336..1891226

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2747_RS09645 (C2747_09620)	pth	1880508..1881104 (+)	597	WP_215331595.1	aminoacyl-tRNA hydrolase	-
C2747_RS09650 (C2747_09625)	-	1881115..1881384 (-)	270	WP_215331596.1	YfhL family 4Fe-4S dicluster ferredoxin	-
C2747_RS09655 (C2747_09630)	coaD	1881402..1881896 (-)	495	WP_215325856.1	pantetheine-phosphate adenylyltransferase	-
C2747_RS09660 (C2747_09635)	rsmD	1881933..1882535 (-)	603	WP_215331597.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
C2747_RS09665 (C2747_09640)	-	1882555..1883898 (-)	1344	WP_215333160.1	pitrilysin family protein	-
C2747_RS09670 (C2747_09645)	-	1883888..1885273 (-)	1386	WP_215331598.1	pitrilysin family protein	-
C2747_RS09675 (C2747_09650)	pilA	1885336..1886226 (+)	891	WP_215331599.1	signal recognition particle-docking protein FtsY	Machinery gene
C2747_RS09680 (C2747_09655)	rpoH	1886320..1887261 (+)	942	WP_215331600.1	RNA polymerase sigma factor RpoH	-
C2747_RS09685 (C2747_09660)	-	1887282..1887887 (-)	606	WP_215331601.1	SCO family protein	-
C2747_RS09690 (C2747_09665)	cyoE	1887895..1888788 (-)	894	WP_215331602.1	heme o synthase	-
C2747_RS09695 (C2747_09670)	-	1888785..1889915 (-)	1131	WP_215331603.1	COX15/CtaA family protein	-
C2747_RS09700 (C2747_09675)	-	1889912..1890571 (-)	660	WP_215331604.1	hypothetical protein	-

Sequence

Protein

• Length: 296 a.a.
• Molecular weight: 31571.26 Da
• Isoelectric Point: 6.5004

>NTDB_id=481765 C2747_RS09675 WP_215331599.1 1885336..1886226(+) (pilA) [Polynucleobacter corsicus strain AP-Melu-1000-A1]
MFGLRKTLGSLFKSNQTDEAWFDALEESLILSDVGLPTTEQLISKLRKAAKSEKASSPEELKQLMIEEVATLLKSLEPSP
NPLYVHEQKTTPEVWLVIGVNGAGKTTTIGKLCRLFQSQGKSVLLAAGDTFRAAARNQLLEWGGRNQVDVIMQESGDAAA
VAHDAIHAAISRKSDILIIDTAGRLATQDHLMEELKKVKRVIGKALPGAPHQTLLVLDGNTGQNGLSQVRAFHAALELSA
LIVTKLDGTAKGGVICALAQTLGDGLKPAVLALGKGEGIDDLAPFTASQYSSELFN

Nucleotide

• Length: 891 bp

>NTDB_id=481765 C2747_RS09675 WP_215331599.1 1885336..1886226(+) (pilA) [Polynucleobacter corsicus strain AP-Melu-1000-A1]
ATGTTCGGCCTACGTAAAACCCTCGGATCCCTATTTAAATCCAATCAGACTGATGAAGCCTGGTTTGATGCCCTTGAAGA
ATCTCTCATTCTGAGTGATGTGGGTCTACCCACGACCGAACAACTGATTAGCAAACTCCGTAAGGCTGCTAAATCGGAAA
AGGCCAGCAGCCCGGAAGAGCTCAAGCAACTGATGATCGAAGAAGTGGCGACACTCCTAAAATCTTTGGAGCCCAGCCCC
AATCCCTTGTATGTCCATGAGCAAAAGACCACACCAGAGGTGTGGCTAGTCATTGGTGTCAATGGCGCCGGCAAAACCAC
CACGATCGGCAAACTCTGCAGACTTTTTCAGTCGCAAGGCAAATCTGTCTTACTGGCAGCTGGCGATACTTTCCGAGCTG
CGGCACGCAACCAGCTCCTTGAATGGGGTGGCCGCAATCAGGTCGATGTCATCATGCAAGAAAGTGGTGATGCGGCGGCA
GTGGCTCATGATGCTATTCATGCGGCGATTTCTCGTAAAAGCGATATTCTGATTATTGATACTGCCGGCAGACTGGCCAC
TCAAGACCACCTGATGGAAGAGTTAAAGAAGGTCAAAAGAGTGATCGGTAAGGCCCTTCCTGGGGCGCCTCACCAGACTT
TGCTTGTTCTTGATGGCAATACCGGTCAAAACGGTTTAAGCCAAGTCAGAGCCTTTCATGCCGCTTTAGAGCTTTCTGCC
TTGATTGTGACTAAATTGGATGGCACCGCTAAGGGTGGAGTCATTTGCGCACTTGCCCAGACCCTCGGAGATGGGCTAAA
ACCCGCGGTTTTAGCCTTAGGCAAAGGTGAGGGAATTGATGATTTAGCCCCCTTCACGGCTAGTCAGTATTCTTCTGAAT
TATTCAATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (92-295)

• SRP54-type protein, helical bundle domain (SRP54_N) (4-68)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.041	99.324	0.517