Detailed information NTG0481699

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GQ367_RS07880
• Genome accession: NZ_CP061299
• Coordinates: 1572369..1573262 (+)
• Length: 297 a.a.
• NCBI ID: WP_215290421.1
• Uniprot ID: -
• Organism: Polynucleobacter sp. MWH-CaK5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1567369..1578262

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQ367_RS07850 (GQ367_07835)	pth	1567658..1568248 (+)	591	WP_215290415.1	aminoacyl-tRNA hydrolase	-
GQ367_RS07855 (GQ367_07840)	-	1568249..1568503 (-)	255	WP_215290416.1	YfhL family 4Fe-4S dicluster ferredoxin	-
GQ367_RS07860 (GQ367_07845)	coaD	1568526..1568999 (-)	474	WP_215290417.1	pantetheine-phosphate adenylyltransferase	-
GQ367_RS07865 (GQ367_07850)	rsmD	1569024..1569623 (-)	600	WP_215290418.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
GQ367_RS07870 (GQ367_07855)	-	1569620..1570939 (-)	1320	WP_215290419.1	pitrilysin family protein	-
GQ367_RS07875 (GQ367_07860)	-	1570941..1572347 (-)	1407	WP_215290420.1	pitrilysin family protein	-
GQ367_RS07880 (GQ367_07865)	pilA	1572369..1573262 (+)	894	WP_215290421.1	signal recognition particle-docking protein FtsY	Machinery gene
GQ367_RS07885 (GQ367_07870)	rpoH	1573334..1574194 (+)	861	WP_251370153.1	RNA polymerase sigma factor RpoH	-
GQ367_RS07890 (GQ367_07875)	-	1574232..1574840 (-)	609	WP_215290422.1	SCO family protein	-
GQ367_RS07895 (GQ367_07880)	cyoE	1574837..1575718 (-)	882	WP_215290423.1	heme o synthase	-
GQ367_RS07900 (GQ367_07885)	-	1575715..1576824 (-)	1110	WP_215290424.1	heme A synthase	-
GQ367_RS07905 (GQ367_07890)	-	1576824..1577486 (-)	663	WP_215290425.1	hypothetical protein	-
GQ367_RS07910 (GQ367_07895)	-	1577479..1578231 (-)	753	WP_215290426.1	SURF1 family protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 31823.47 Da
• Isoelectric Point: 6.8454

>NTDB_id=481699 GQ367_RS07880 WP_215290421.1 1572369..1573262(+) (pilA) [Polynucleobacter sp. MWH-CaK5]
MFGLRKTLSNLFNLQKVDEQWYESLEEALLLGDVGMSATQTLISQLRREAKNQKAESADDLKVILATLVENLLSKLERPQ
NPLDLLPGNSGQPTVWLIVGVNGAGKTTSIGKICHHFQQSGHKVLLGAGDTFRAAAREQLIAWGERNQVAVIAQESGDAA
AVAHDAVKAGQSRQQDIVIIDTAGRLSTQAHLMDELKKVKRVIGKAQESAPHETILVIDGNTGQNGMAQVKAFHEALNLS
AIIVTKLDGTAKGGILCAIASELSENPPSVLAIGLGEQMSDLKPFKASEFAKSLIPK

Nucleotide

• Length: 894 bp

>NTDB_id=481699 GQ367_RS07880 WP_215290421.1 1572369..1573262(+) (pilA) [Polynucleobacter sp. MWH-CaK5]
ATGTTCGGATTACGTAAAACCTTATCAAACCTATTTAATCTTCAAAAAGTTGATGAACAATGGTACGAATCCCTAGAAGA
AGCACTTCTATTGGGAGATGTTGGCATGAGTGCCACTCAAACCCTGATCAGTCAACTTCGCCGTGAAGCAAAAAATCAAA
AAGCTGAATCTGCTGATGATCTAAAGGTCATTCTAGCCACATTGGTCGAAAACCTCTTAAGCAAACTTGAAAGACCCCAA
AATCCGCTGGATTTATTACCCGGCAATTCAGGGCAACCGACTGTATGGCTGATCGTAGGGGTCAATGGGGCTGGTAAAAC
AACCAGCATTGGCAAAATTTGTCATCACTTTCAACAATCTGGGCACAAGGTCTTACTAGGCGCCGGCGACACCTTTAGAG
CAGCTGCCAGAGAACAGCTCATTGCTTGGGGTGAGCGAAATCAAGTAGCAGTCATTGCTCAAGAGAGTGGTGATGCTGCT
GCAGTCGCCCACGATGCCGTTAAGGCTGGTCAATCGCGTCAGCAAGACATAGTCATCATTGACACTGCTGGCAGACTATC
CACTCAAGCGCACCTGATGGATGAGCTCAAGAAAGTCAAACGAGTGATCGGCAAGGCACAAGAATCGGCCCCACACGAGA
CCATTTTGGTGATTGATGGCAACACAGGTCAAAATGGCATGGCTCAAGTAAAGGCCTTTCATGAGGCCCTCAATTTATCG
GCCATCATTGTCACCAAACTTGATGGAACCGCTAAAGGCGGTATTTTGTGTGCGATTGCTTCGGAGTTATCCGAGAACCC
TCCAAGTGTTCTGGCCATTGGACTTGGTGAACAAATGTCTGATTTAAAGCCATTCAAGGCCTCAGAATTTGCTAAATCCT
TGATTCCAAAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (93-295)

• SRP54-type protein, helical bundle domain (SRP54_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.027	98.316	0.502