Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NMBNZ0533_RS08215 Genome accession   NC_017518
Coordinates   1543976..1544437 (+) Length   153 a.a.
NCBI ID   WP_002235957.1    Uniprot ID   -
Organism   Neisseria meningitidis NZ-05/33     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1538976..1549437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBNZ0533_RS08190 (NMBNZ0533_1452) - 1540103..1540312 (-) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -
  NMBNZ0533_RS08195 (NMBNZ0533_1453) - 1540656..1541462 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  NMBNZ0533_RS08200 (NMBNZ0533_1454) - 1541519..1542784 (-) 1266 WP_014581011.1 Glu/Leu/Phe/Val dehydrogenase -
  NMBNZ0533_RS08210 (NMBNZ0533_1455) - 1543191..1543901 (+) 711 WP_002216874.1 phosphoglycolate phosphatase -
  NMBNZ0533_RS08215 (NMBNZ0533_1456) recX 1543976..1544437 (+) 462 WP_002235957.1 recombination regulator RecX Regulator
  NMBNZ0533_RS15455 - 1544511..1544672 (+) 162 WP_002232730.1 hypothetical protein -
  NMBNZ0533_RS08230 (NMBNZ0533_1457) - 1544825..1545307 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  NMBNZ0533_RS08235 (NMBNZ0533_1458) - 1545668..1546915 (-) 1248 WP_002234058.1 M23 family metallopeptidase -
  NMBNZ0533_RS08240 (NMBNZ0533_1459) surE 1547171..1547917 (-) 747 WP_002237186.1 5'/3'-nucleotidase SurE -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17791.07 Da        Isoelectric Point: 9.9314

>NTDB_id=48164 NMBNZ0533_RS08215 WP_002235957.1 1543976..1544437(+) (recX) [Neisseria meningitidis NZ-05/33]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQTAIDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=48164 NMBNZ0533_RS08215 WP_002235957.1 1543976..1544437(+) (recX) [Neisseria meningitidis NZ-05/33]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAAGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGACCGCCATAGACGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.732

100

0.967

Multiple sequence alignment