Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ICJ61_RS00575 | Genome accession | NZ_CP061284 |
| Coordinates | 103178..105610 (+) | Length | 810 a.a. |
| NCBI ID | WP_010332750.1 | Uniprot ID | A0A9Q6A5H8 |
| Organism | Bacillus halotolerans strain XH-1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98178..110610
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ICJ61_RS00560 (ICJ61_00560) | ctsR | 101055..101519 (+) | 465 | WP_010332747.1 | transcriptional regulator CtsR | - |
| ICJ61_RS00565 (ICJ61_00565) | - | 101533..102090 (+) | 558 | WP_095714843.1 | UvrB/UvrC motif-containing protein | - |
| ICJ61_RS00570 (ICJ61_00570) | - | 102090..103181 (+) | 1092 | WP_106021668.1 | protein arginine kinase | - |
| ICJ61_RS00575 (ICJ61_00575) | clpC | 103178..105610 (+) | 2433 | WP_010332750.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| ICJ61_RS00580 (ICJ61_00580) | radA | 105702..107078 (+) | 1377 | WP_044153447.1 | DNA repair protein RadA | Machinery gene |
| ICJ61_RS00585 (ICJ61_00585) | disA | 107082..108164 (+) | 1083 | WP_003242042.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ICJ61_RS00590 (ICJ61_00590) | - | 108284..109384 (+) | 1101 | WP_188323433.1 | PIN/TRAM domain-containing protein | - |
| ICJ61_RS00595 (ICJ61_00595) | ispD | 109399..110097 (+) | 699 | WP_188323434.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| ICJ61_RS00600 (ICJ61_00600) | ispF | 110090..110566 (+) | 477 | WP_099043918.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90054.61 Da Isoelectric Point: 6.1838
>NTDB_id=481489 ICJ61_RS00575 WP_010332750.1 103178..105610(+) (clpC) [Bacillus halotolerans strain XH-1]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVSVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLA
EIVSLMSDQLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGHHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVSVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLA
EIVSLMSDQLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGHHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=481489 ICJ61_RS00575 WP_010332750.1 103178..105610(+) (clpC) [Bacillus halotolerans strain XH-1]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAGGTACTGGCGCTTGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAATATCGGCACTGAGCATATTTTATTAGGACTGGTGCGAGAAGGAGAGGGCATCGCTGCTAAAGCACTTCAAGCGCTTG
GACTTGGTTCAGATAAAATCCAAAAAGAAGTTGAGAGCTTAATTGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCGAGAGCTAAAAAAGTCATTGAGCTATCAATGGATGAGGCCAGAAAACTCGGCCATTCTTATGTGGGAACAGAGCA
TATTCTTCTTGGACTTATTCGCGAAGGTGAAGGTGTGGCTGCGAGAGTGCTTAACAATCTCGGAGTCAGCTTGAATAAAG
CAAGACAGCAAGTGCTTCAGCTTCTTGGAAGTAATGAAACAGGTTCATCAGCGGCTGGAACAAACAGCAATGCGAATACG
CCTACACTAGATAGCCTGGCAAGAGATTTAACAGCGATTGCGAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
AGAAATTCAGCGTGTCATTGAAGTGCTGAGCCGCAGAACGAAAAACAATCCTGTTCTGATTGGGGAACCGGGCGTAGGGA
AAACGGCTATCGCAGAAGGTCTTGCACAGCAAATTATCAATAATGAAGTTCCCGAAATTTTACGGGATAAACGCGTTATG
ACATTAGACATGGGAACAGTGGTTGCCGGTACAAAATATCGCGGTGAATTTGAGGATCGTTTGAAGAAAGTTATGGATGA
AATCCGTCAGGCAGGAAACATCATTCTATTCATTGATGAGCTCCATACACTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCCAACATTTTGAAACCTTCACTTGCTCGCGGAGAACTTCAGTGCATTGGTGCGACAACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCTCTGGAACGCCGTTTTCAGCCAATCCAGGTTGATCAGCCGTCTGTAGACGAAAG
CATTCAAATCCTAAAAGGCTTGCGTGACCGATATGAAGCCCACCACCGCGTTTCTATCACTGACGAAGCCATTGAGGCTG
CGGTTAAGCTTTCTGACAGATATATCTCTGACCGTTTCCTTCCGGATAAAGCTATTGACTTGATCGATGAAGCGGGTTCA
AAGGTCAGATTGCGTTCCTTTACAACGCCTCCTAATTTAAAAGAGCTTGAACAGAAACTTGATGAAGTTCGTAAAGAGAA
GGATGCTGCGGTGCAAAGCCAAGAATTTGAAAAAGCGGCTTCCTTGCGTGATACGGAACAGCGTTTGCGTGAACAAGTGG
AAGATACGAAAAAATCATGGAAAGAGAAGCAGGGACAGGAAAACTCAGAGGTTTCTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTATCAAAAATCGCTCAAACAGAAACAGATAAGCTTCTTAATATGGAGAGCATTCTTCA
TTCCCGTGTCATCGGCCAAGATGAAGCTGTTGTAGCCGTTGCTAAAGCGGTCAGACGTGCAAGAGCAGGGCTAAAAGACC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACGGAGCTTGCACGGGCACTTGCTGAG
TCTATCTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCGACTTCTAGACTTGT
AGGTTCACCTCCAGGGTATGTGGGATACGATGAGGGCGGCCAATTAACAGAGAAGGTAAGAAGAAAACCATACTCTGTTG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGACGTCTTCAATATCCTCCTTCAAGTACTTGAGGACGGACGATTGACG
GATTCTAAAGGCCGTACAGTTGATTTCCGCAACACGATTCTGATCATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAACAAATATGTCGGCTTCAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAGGATAAAGTGATGGGTGAGCTGA
AACGTGCGTTCAGACCGGAATTCATCAACCGTATTGATGAAATTATCGTCTTCCATTCACTCGAGAAAAAACATCTGGCT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGTCTTAAAGAACAGGATCTTTCTATTGAATTGACGGAAGCTGC
GAAAGCAAAAGTCGCGGAAGAGGGCGTAGATCTTGAATACGGTGCCCGCCCGCTCAGAAGAGCCATTCAAAAACATGTGG
AGGACCGTTTATCTGAAGAGCTGCTCAGAGGTAACATTCATAAAGGACACCATATCGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACAGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAGGTACTGGCGCTTGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAATATCGGCACTGAGCATATTTTATTAGGACTGGTGCGAGAAGGAGAGGGCATCGCTGCTAAAGCACTTCAAGCGCTTG
GACTTGGTTCAGATAAAATCCAAAAAGAAGTTGAGAGCTTAATTGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCGAGAGCTAAAAAAGTCATTGAGCTATCAATGGATGAGGCCAGAAAACTCGGCCATTCTTATGTGGGAACAGAGCA
TATTCTTCTTGGACTTATTCGCGAAGGTGAAGGTGTGGCTGCGAGAGTGCTTAACAATCTCGGAGTCAGCTTGAATAAAG
CAAGACAGCAAGTGCTTCAGCTTCTTGGAAGTAATGAAACAGGTTCATCAGCGGCTGGAACAAACAGCAATGCGAATACG
CCTACACTAGATAGCCTGGCAAGAGATTTAACAGCGATTGCGAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
AGAAATTCAGCGTGTCATTGAAGTGCTGAGCCGCAGAACGAAAAACAATCCTGTTCTGATTGGGGAACCGGGCGTAGGGA
AAACGGCTATCGCAGAAGGTCTTGCACAGCAAATTATCAATAATGAAGTTCCCGAAATTTTACGGGATAAACGCGTTATG
ACATTAGACATGGGAACAGTGGTTGCCGGTACAAAATATCGCGGTGAATTTGAGGATCGTTTGAAGAAAGTTATGGATGA
AATCCGTCAGGCAGGAAACATCATTCTATTCATTGATGAGCTCCATACACTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCCAACATTTTGAAACCTTCACTTGCTCGCGGAGAACTTCAGTGCATTGGTGCGACAACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCTCTGGAACGCCGTTTTCAGCCAATCCAGGTTGATCAGCCGTCTGTAGACGAAAG
CATTCAAATCCTAAAAGGCTTGCGTGACCGATATGAAGCCCACCACCGCGTTTCTATCACTGACGAAGCCATTGAGGCTG
CGGTTAAGCTTTCTGACAGATATATCTCTGACCGTTTCCTTCCGGATAAAGCTATTGACTTGATCGATGAAGCGGGTTCA
AAGGTCAGATTGCGTTCCTTTACAACGCCTCCTAATTTAAAAGAGCTTGAACAGAAACTTGATGAAGTTCGTAAAGAGAA
GGATGCTGCGGTGCAAAGCCAAGAATTTGAAAAAGCGGCTTCCTTGCGTGATACGGAACAGCGTTTGCGTGAACAAGTGG
AAGATACGAAAAAATCATGGAAAGAGAAGCAGGGACAGGAAAACTCAGAGGTTTCTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTATCAAAAATCGCTCAAACAGAAACAGATAAGCTTCTTAATATGGAGAGCATTCTTCA
TTCCCGTGTCATCGGCCAAGATGAAGCTGTTGTAGCCGTTGCTAAAGCGGTCAGACGTGCAAGAGCAGGGCTAAAAGACC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACGGAGCTTGCACGGGCACTTGCTGAG
TCTATCTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCGACTTCTAGACTTGT
AGGTTCACCTCCAGGGTATGTGGGATACGATGAGGGCGGCCAATTAACAGAGAAGGTAAGAAGAAAACCATACTCTGTTG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGACGTCTTCAATATCCTCCTTCAAGTACTTGAGGACGGACGATTGACG
GATTCTAAAGGCCGTACAGTTGATTTCCGCAACACGATTCTGATCATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAACAAATATGTCGGCTTCAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAGGATAAAGTGATGGGTGAGCTGA
AACGTGCGTTCAGACCGGAATTCATCAACCGTATTGATGAAATTATCGTCTTCCATTCACTCGAGAAAAAACATCTGGCT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGTCTTAAAGAACAGGATCTTTCTATTGAATTGACGGAAGCTGC
GAAAGCAAAAGTCGCGGAAGAGGGCGTAGATCTTGAATACGGTGCCCGCCCGCTCAGAAGAGCCATTCAAAAACATGTGG
AGGACCGTTTATCTGAAGAGCTGCTCAGAGGTAACATTCATAAAGGACACCATATCGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACAGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
98.889 |
100 |
0.989 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.249 |
99.012 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
46.489 |
100 |
0.474 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.247 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae Rx1 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpE | Streptococcus mutans UA159 |
53.159 |
80.123 |
0.426 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.523 |
87.778 |
0.426 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae Rx1 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae D39 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae R6 |
53.772 |
76.914 |
0.414 |