Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ICJ61_RS00245 | Genome accession | NZ_CP061284 |
| Coordinates | 44461..44751 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus halotolerans strain XH-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39461..49751
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ICJ61_RS00205 (ICJ61_00205) | darA | 39482..39811 (+) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
| ICJ61_RS00210 (ICJ61_00210) | - | 39824..40264 (+) | 441 | WP_024123606.1 | YaaR family protein | - |
| ICJ61_RS00215 (ICJ61_00215) | holB | 40276..41265 (+) | 990 | WP_127696182.1 | DNA polymerase III subunit delta' | - |
| ICJ61_RS00220 (ICJ61_00220) | ricT | 41268..42095 (+) | 828 | WP_010332686.1 | competence/sporulation regulator complex protein RicT | - |
| ICJ61_RS00225 (ICJ61_00225) | yabA | 42110..42469 (+) | 360 | WP_010332687.1 | replication initiation-control protein YabA | - |
| ICJ61_RS00230 (ICJ61_00230) | - | 42529..43272 (+) | 744 | WP_106021672.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ICJ61_RS00235 (ICJ61_00235) | - | 43259..43558 (+) | 300 | WP_010332689.1 | GIY-YIG nuclease family protein | - |
| ICJ61_RS00240 (ICJ61_00240) | rsmI | 43533..44411 (+) | 879 | WP_103672539.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ICJ61_RS00245 (ICJ61_00245) | abrB | 44461..44751 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| ICJ61_RS00250 (ICJ61_00250) | metG | 45248..47242 (+) | 1995 | WP_188323427.1 | methionine--tRNA ligase | - |
| ICJ61_RS00255 (ICJ61_00255) | - | 47319..48086 (+) | 768 | WP_069487699.1 | TatD family hydrolase | - |
| ICJ61_RS00260 (ICJ61_00260) | - | 48332..49555 (+) | 1224 | WP_223203920.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=481488 ICJ61_RS00245 WP_003226760.1 44461..44751(-) (abrB) [Bacillus halotolerans strain XH-1]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=481488 ICJ61_RS00245 WP_003226760.1 44461..44751(-) (abrB) [Bacillus halotolerans strain XH-1]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCTGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCTGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |