Detailed information    

insolico Bioinformatically predicted

Overview


Name   tpc   Type   Machinery gene
Locus tag   NMBNZ0533_RS04205 Genome accession   NC_017518
Coordinates   794102..795100 (-) Length   332 a.a.
NCBI ID   WP_014582402.1    Uniprot ID   A0A425B2J6
Organism   Neisseria meningitidis NZ-05/33     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context


Location: 789102..800100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBNZ0533_RS04185 (NMBNZ0533_0735) - 790480..791106 (-) 627 WP_014582401.1 phosphoribosylanthranilate isomerase -
  NMBNZ0533_RS04190 (NMBNZ0533_0736) greB 791165..791656 (-) 492 WP_002214159.1 transcription elongation factor GreB -
  NMBNZ0533_RS04195 (NMBNZ0533_0737) purF 791756..793300 (-) 1545 WP_002223939.1 amidophosphoribosyltransferase -
  NMBNZ0533_RS15915 - 793445..793576 (-) 132 WP_256824360.1 hypothetical protein -
  NMBNZ0533_RS04200 (NMBNZ0533_0738) - 793612..794109 (-) 498 WP_002219589.1 CvpA family protein -
  NMBNZ0533_RS04205 (NMBNZ0533_0739) tpc 794102..795100 (-) 999 WP_014582402.1 cell division protein FtsN Machinery gene
  NMBNZ0533_RS04210 (NMBNZ0533_0740) folC 795113..796387 (-) 1275 WP_014582403.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  NMBNZ0533_RS04215 (NMBNZ0533_0741) - 796419..796859 (-) 441 WP_002219586.1 protein YgfX -
  NMBNZ0533_RS04220 (NMBNZ0533_0742) - 796864..797223 (-) 360 WP_002219585.1 hypothetical protein -
  NMBNZ0533_RS04225 (NMBNZ0533_0743) - 797296..798024 (-) 729 WP_002219584.1 amino acid ABC transporter ATP-binding protein -
  NMBNZ0533_RS04235 (NMBNZ0533_0744) rsmA 798197..798976 (-) 780 WP_002219583.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  NMBNZ0533_RS04240 (NMBNZ0533_0745) - 799173..799862 (+) 690 WP_002219582.1 hypothetical protein -

Sequence


Protein


Download         Length: 332 a.a.        Molecular weight: 35582.96 Da        Isoelectric Point: 10.1759

>NTDB_id=48145 NMBNZ0533_RS04205 WP_014582402.1 794102..795100(-) (tpc) [Neisseria meningitidis NZ-05/33]
MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDL
AGEDKPSAADSEISEPENVGAPLVLINERLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAFEKP
KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAESKKTAEKDRSDGKKHETA
QKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKL
RVHGIAGQVTNE

Nucleotide


Download         Length: 999 bp        

>NTDB_id=48145 NMBNZ0533_RS04205 WP_014582402.1 794102..795100(-) (tpc) [Neisseria meningitidis NZ-05/33]
ATGTCCGAAAACAAACAAAACGAAGTCCTGAGCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGTTGCTTGGTTGCCGCCTCCTGCATCCTGCTGGCAGCCGCCCTCAGTTCCGGCCCTGCCGAACAGACTGCCGGCGAAA
CAAGCGGCGTAGAAAACAAAGCGGCAGGTGCGGCACAAACCCCTGCCTTGAAATCCGCCGCCGACAAACCGCAGGACTTG
GCAGGCGAAGACAAGCCTTCTGCCGCCGACAGCGAAATCAGCGAGCCTGAAAACGTAGGCGCGCCGCTGGTGCTGATTAA
CGAGCGCCTCGAAGACAGCAACATCAAAGGTTTGGAAGCATCCGAGAAACTGCAACAGGCAGAAACCGCCAAAACCGCAC
CGAAGCAGGCAAAACAACGCGCTGCCGAAAAAGTGCCGGCAACTGCCGACAGTACGGATACGGTAGCGTTTGAAAAACCG
AAACGCACTGCCGAAACAAAACCGCAAAAAGCGGAACGCACTGCCAAAGCCAAGCCCAAAGCCAAAGAAACCAAAACCGC
CGAAAAAGTTGCCGACAAACCGAAAACTGCCGCCGAAAAAACCAAACCGGATACGGCAAAATCCGACAGCGCGGTAAAAG
AAGCGAAAAAAGCCGACAAGGCTGAAAGCAAAAAAACAGCCGAAAAAGACCGTTCGGACGGCAAAAAACACGAAACGGCA
CAAAAAACCGACAAAGCGGACAAGACCAAAACCGCCGAGAAGGAAAAATCCGGTAAAAAAGCCGCCATTCAGGCAGGTTA
TGCCGAAAAAGAACGCGCCTTAAGCCTCCAGCGCAAAATGAAGGCGGCGGGTATCGATTCGACCATCACCGAAATTATGA
CCGACAACGGCAAAGTTTACCGCGTCAAATCAAGCAACTATAAAAACGCAAGGGATGCCGAACGCGATTTGAACAAATTG
CGCGTACACGGTATCGCCGGTCAGGTAACGAATGAATAG

Domains


Predicted by InterproScan.

(259-330)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A425B2J6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

89.306

100

0.931


Multiple sequence alignment