Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   NMBNZ0533_RS03035 Genome accession   NC_017518
Coordinates   579673..581715 (+) Length   680 a.a.
NCBI ID   WP_002224052.1    Uniprot ID   -
Organism   Neisseria meningitidis NZ-05/33     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 574673..586715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBNZ0533_RS03010 (NMBNZ0533_0532) - 575704..575835 (+) 132 WP_002214465.1 response regulator transcription factor -
  NMBNZ0533_RS03015 (NMBNZ0533_0533) - 575874..577124 (+) 1251 WP_002219777.1 ATP-binding protein -
  NMBNZ0533_RS03020 (NMBNZ0533_0534) rng 577159..578652 (-) 1494 WP_002214463.1 ribonuclease G -
  NMBNZ0533_RS03025 (NMBNZ0533_0535) grxC 578866..579123 (+) 258 WP_002219776.1 glutaredoxin 3 -
  NMBNZ0533_RS03030 (NMBNZ0533_0536) secB 579144..579587 (+) 444 WP_002214461.1 protein-export chaperone SecB -
  NMBNZ0533_RS03035 (NMBNZ0533_0537) recG 579673..581715 (+) 2043 WP_002224052.1 ATP-dependent DNA helicase RecG Machinery gene
  NMBNZ0533_RS15320 - 582504..582629 (+) 126 Protein_549 IS5/IS1182 family transposase -
  NMBNZ0533_RS03040 (NMBNZ0533_0538) argC 582779..583822 (-) 1044 WP_002219775.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  NMBNZ0533_RS03045 (NMBNZ0533_0539) - 583819..584100 (-) 282 WP_002219774.1 hypothetical protein -
  NMBNZ0533_RS03055 (NMBNZ0533_0540) - 584468..585622 (+) 1155 WP_002219773.1 cupin domain-containing protein -
  NMBNZ0533_RS15635 - 585631..585837 (+) 207 WP_002244292.1 hypothetical protein -
  NMBNZ0533_RS12315 - 586042..586302 (+) 261 WP_002219771.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74998.11 Da        Isoelectric Point: 8.0869

>NTDB_id=48143 NMBNZ0533_RS03035 WP_002224052.1 579673..581715(+) (recG) [Neisseria meningitidis NZ-05/33]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTA
AALGGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAIGTHALFSDGVTFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDKLPPGRTPIKTRLVNNVRRAEVEGFVLNTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGELNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=48143 NMBNZ0533_RS03035 WP_002224052.1 579673..581715(+) (recG) [Neisseria meningitidis NZ-05/33]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGCCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGTTGATTGTCCAAATC
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAACAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGATGAACTTTTGGCGCAACAGCTTTCGATGCGCTTGGCGCGACAGAAGCGTATCGGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCTACCCGATGCACCGCCTGCTGCAGGGCGATGTCGGCAGCGGCA
AAACCATTGTCGCCGCCTTGTCCGCGCTGACCGCCATCGAATCCGGTGCGCAGGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAACATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCATCGGCACGCACGCCCTGT
TTTCAGACGGCGTGACGTTTCACAATTTGGGCCTGACCATCGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTTAAAAACAAAGGGCGCGAAGTCCATCAGTTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACAAACTGCCGCCCGGGCGCACCCCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCAATACTTGCCGAAAAGGGCGGCAGGCGTATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAGCTGAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTGATGGCACGGTTTTCTTCGGGGGAGCTGAACGTCT
TGGTCGCCACCACCGTTATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGTCGGGTCGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGTCAAAGCGGCGTGCCTATGCTGCGTTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAATCGCCCCGATACTGATTGAACAAAACCCCGAAATCGTCGAAGCGCATTT
GGCACGATGGCTTTCCGGCAGGGAAGGTTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

RecG wedge domain (RecG_wedge)

(15-164)

DEAD/DEAH box helicase (DEAD)

(262-421)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

98.824

100

0.988

Multiple sequence alignment