Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ICJ04_RS13330 Genome accession   NZ_CP061204
Coordinates   3069577..3069978 (-) Length   133 a.a.
NCBI ID   WP_042614342.1    Uniprot ID   A0A8X8FWD5
Organism   Stenotrophomonas sp. 169     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3064577..3074978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICJ04_RS13315 (ICJ04_13315) - 3066580..3068616 (-) 2037 WP_188324702.1 methyl-accepting chemotaxis protein -
  ICJ04_RS13320 (ICJ04_13320) - 3068666..3069196 (-) 531 WP_188324703.1 chemotaxis protein CheW -
  ICJ04_RS13325 (ICJ04_13325) - 3069196..3069558 (-) 363 WP_188324704.1 response regulator -
  ICJ04_RS13330 (ICJ04_13330) pilG 3069577..3069978 (-) 402 WP_042614342.1 twitching motility response regulator PilG Regulator
  ICJ04_RS13335 (ICJ04_13335) gshB 3070195..3071142 (+) 948 WP_188324705.1 glutathione synthase -
  ICJ04_RS13340 (ICJ04_13340) - 3071142..3072020 (+) 879 WP_188324706.1 energy transducer TonB -
  ICJ04_RS13345 (ICJ04_13345) tsaB 3072674..3073378 (-) 705 WP_188324707.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14704.07 Da        Isoelectric Point: 6.3483

>NTDB_id=481334 ICJ04_RS13330 WP_042614342.1 3069577..3069978(-) (pilG) [Stenotrophomonas sp. 169]
MTENMTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=481334 ICJ04_RS13330 WP_042614342.1 3069577..3069978(-) (pilG) [Stenotrophomonas sp. 169]
ATGACTGAGAACATGACTGCGGGCGGGGAGCTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACGATCCGCCG
GACCGCGGAAACGTTGTTGAAACGGGAAGGCTGCGAGGTCGTCACCGCGACCGACGGCTTCGAGGCACTTGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGTCTGGATGGGTATCAGACCTGCGCGCTGATCAAG
GGAAACCAGCTGTTCAAGTCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGTGGTCGCAT
CGTGGGTTCGGAGCAGTACCTGACCAAGCCCTTTACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677