Detailed information NTG0481234

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: IAQ68_RS17570
• Genome accession: NZ_CP061176
• Coordinates: 3581778..3582923 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ZF145
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3576778..3587923

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IAQ68_RS17550 (IAQ68_17550)	-	3577675..3578103 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
IAQ68_RS17555 (IAQ68_17555)	-	3578257..3578769 (+)	513	Protein_3433	bacteriocin biosynthesis protein AlbG	-
IAQ68_RS17560 (IAQ68_17560)	-	3578776..3580152 (-)	1377	WP_032875890.1	YncE family protein	-
IAQ68_RS17565 (IAQ68_17565)	-	3580192..3581547 (-)	1356	WP_032875887.1	YncE family protein	-
IAQ68_RS17570 (IAQ68_17570)	rapF	3581778..3582923 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
IAQ68_RS17575 (IAQ68_17575)	-	3582907..3583026 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
IAQ68_RS17580 (IAQ68_17580)	speB	3583149..3584021 (-)	873	WP_032875884.1	agmatinase	-
IAQ68_RS17585 (IAQ68_17585)	speE	3584080..3584910 (-)	831	WP_003151052.1	spermidine synthase	-
IAQ68_RS17590 (IAQ68_17590)	-	3585110..3587182 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
IAQ68_RS17595 (IAQ68_17595)	-	3587207..3587640 (-)	434	Protein_3441	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=481234 IAQ68_RS17570 WP_074534220.1 3581778..3582923(+) (rapF) [Bacillus velezensis strain ZF145]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=481234 IAQ68_RS17570 WP_074534220.1 3581778..3582923(+) (rapF) [Bacillus velezensis strain ZF145]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541