Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IAQ67_RS24210 Genome accession   NZ_CP061172
Coordinates   5241700..5242653 (-) Length   317 a.a.
NCBI ID   WP_190297993.1    Uniprot ID   A0A7H0Y700
Organism   Paenibacillus peoriae strain ZF390     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5236700..5247653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IAQ67_RS24185 (IAQ67_24185) - 5237169..5238080 (-) 912 WP_190297989.1 aldo/keto reductase -
  IAQ67_RS24190 (IAQ67_24190) - 5238238..5238981 (-) 744 WP_190297990.1 alpha/beta hydrolase -
  IAQ67_RS24195 (IAQ67_24195) - 5239015..5239995 (-) 981 WP_190297991.1 siderophore ABC transporter substrate-binding protein -
  IAQ67_RS24200 (IAQ67_24200) - 5240008..5240766 (-) 759 WP_039273792.1 ABC transporter ATP-binding protein -
  IAQ67_RS24205 (IAQ67_24205) - 5240760..5241710 (-) 951 WP_190297992.1 iron chelate uptake ABC transporter family permease subunit -
  IAQ67_RS24210 (IAQ67_24210) ceuB 5241700..5242653 (-) 954 WP_190297993.1 ABC transporter permease Machinery gene
  IAQ67_RS24215 (IAQ67_24215) - 5242984..5243661 (+) 678 WP_190299626.1 response regulator transcription factor -
  IAQ67_RS24220 (IAQ67_24220) - 5243663..5244580 (+) 918 WP_190297994.1 sensor histidine kinase -
  IAQ67_RS24225 (IAQ67_24225) - 5244689..5245366 (+) 678 WP_103048293.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34728.72 Da        Isoelectric Point: 9.9012

>NTDB_id=481154 IAQ67_RS24210 WP_190297993.1 5241700..5242653(-) (ceuB) [Paenibacillus peoriae strain ZF390]
MKLRYLILAFLVLAFASVFIGVHDVTPLDLFHLTNDQAQVLLISRFPRLISIIIAGASMSICGLIMQQLTRNRFVSPTTA
GTMDAARLGVLVAIMVFGAAGFWTKMLTAFGFALGGTLIFMKILDKIRFKDPVFIPLVGLMFGGILNSVTTFFAYKYNLI
QGISSWMQGDFSLIMSGRYEMLYLSIPLVALAYIYANRFTIAGMGEDFAANLGVHYKRTVNVGLVIVALVSSVVILTVGT
IPFLGLVVPNLVSMYMGDNLKKSLAHTAILGAVFVLFCDILGRVIIYPYEISVGLTVGVIGSALFLYLLLRRRAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=481154 IAQ67_RS24210 WP_190297993.1 5241700..5242653(-) (ceuB) [Paenibacillus peoriae strain ZF390]
ATGAAATTGCGTTATTTAATACTGGCTTTTCTGGTACTGGCCTTCGCCTCGGTTTTTATTGGTGTTCATGATGTAACTCC
ACTTGATTTGTTCCACTTAACCAACGATCAGGCGCAGGTGCTCCTGATTAGCAGATTCCCACGATTGATCAGTATCATTA
TCGCAGGGGCGAGTATGAGTATCTGTGGGCTCATTATGCAGCAGCTTACCCGGAACCGATTCGTATCGCCCACCACCGCA
GGGACGATGGACGCGGCACGATTGGGTGTGCTGGTGGCTATTATGGTGTTTGGAGCGGCGGGATTTTGGACGAAGATGCT
GACGGCTTTCGGATTTGCTCTAGGGGGAACACTGATTTTCATGAAAATACTGGATAAAATCCGTTTCAAGGACCCGGTAT
TTATCCCGCTTGTCGGTTTGATGTTTGGAGGCATTTTAAATTCGGTAACGACCTTTTTTGCTTACAAATACAATCTGATC
CAGGGCATTTCTTCGTGGATGCAGGGGGATTTTTCTCTAATCATGAGTGGTCGCTACGAGATGCTATATCTTAGTATTCC
TTTGGTTGCGTTGGCGTACATATATGCGAATCGTTTTACAATTGCAGGCATGGGTGAGGATTTTGCGGCCAACTTGGGTG
TACATTACAAGCGCACCGTCAATGTCGGTTTGGTGATCGTGGCTTTGGTTTCCTCTGTTGTCATCTTAACGGTCGGGACG
ATTCCCTTTTTGGGGCTGGTTGTACCCAATCTGGTCAGCATGTATATGGGGGATAATCTGAAAAAAAGCCTGGCCCATAC
TGCGATCCTGGGCGCCGTCTTTGTTCTGTTTTGCGATATTTTGGGACGGGTGATCATTTATCCGTATGAAATTTCTGTAG
GGCTTACGGTTGGTGTGATCGGGAGCGCGTTGTTCTTGTATTTGCTGCTGAGGAGAAGGGCTTATGAATCCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H0Y700

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.111

99.369

0.508