Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   IAQ67_RS12135 Genome accession   NZ_CP061172
Coordinates   2719065..2720828 (+) Length   587 a.a.
NCBI ID   WP_190299301.1    Uniprot ID   A0A7H0YF25
Organism   Paenibacillus peoriae strain ZF390     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2714065..2725828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IAQ67_RS12110 (IAQ67_12110) - 2715050..2716573 (+) 1524 WP_103048524.1 spore germination protein -
  IAQ67_RS12115 (IAQ67_12115) - 2716560..2717783 (+) 1224 WP_103048525.1 Ger(x)C family spore germination protein -
  IAQ67_RS12120 (IAQ67_12120) - 2717789..2718019 (+) 231 WP_023988612.1 hypothetical protein -
  IAQ67_RS12125 (IAQ67_12125) - 2718123..2718269 (+) 147 WP_155252442.1 hypothetical protein -
  IAQ67_RS12130 (IAQ67_12130) - 2718581..2718991 (+) 411 WP_023988613.1 MarR family winged helix-turn-helix transcriptional regulator -
  IAQ67_RS12135 (IAQ67_12135) rcrP 2719065..2720828 (+) 1764 WP_190299301.1 ABC transporter ATP-binding protein Regulator
  IAQ67_RS12140 (IAQ67_12140) rcrQ 2720821..2722671 (+) 1851 WP_103048527.1 ABC transporter ATP-binding protein Regulator
  IAQ67_RS12145 (IAQ67_12145) - 2722792..2723100 (+) 309 WP_025723019.1 hypothetical protein -
  IAQ67_RS12150 (IAQ67_12150) - 2723535..2724428 (-) 894 WP_103048528.1 LysR family transcriptional regulator -
  IAQ67_RS12155 (IAQ67_12155) - 2724774..2725214 (+) 441 WP_023988632.1 DMT family transporter -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64797.10 Da        Isoelectric Point: 7.7403

>NTDB_id=481141 IAQ67_RS12135 WP_190299301.1 2719065..2720828(+) (rcrP) [Paenibacillus peoriae strain ZF390]
MLKIFKYLKKNEWMLVLCSLAFIVVQVWLDLKLPDYMAEITTKLQTEGTPVSELLIPGSYMLFCAVGSMIASIIVGYFAA
KVAAGLAMRLRAMVFDKTLSFSMEEMNNFSTASLITRSTNDVTQIQTVVALGLQVIIKAPILAVWAIVKIADKNWQWTAS
TGAAVAALILMLSVIVVFALPSFQRIQRLTDNLNRVTREHLIGLRVVRAYNADQYQQEKFEQANVELTNTNLFANRLMTM
IGPGMTFIMSGLSVSIYCIGAYLINGAAVPDRITLFSNMVVFSSYAMQVVMAFMMVSMIFILMPRASISAKRIMEVLNTE
SSIVNGHETTGEESVMGQVEFRNVSFKYPDAEEAVLRNISFTAKRGETVAFIGATGSGKTSVINLIPRFYDVTEGEVLVD
GVNVRNYNQQALHNKIGYVPQRAVLFNGTVVSNVSYGDNGRAGASEKLVKEAVGIAQGTEFVEKMDGQYQGRISQGGANV
SGGQKQRLSIARAIYRQPEIYIFDDSFSALDYRTDRILRSALKKETGHATTLIVGQRIGTIKDADRIIVLDQGEIVGSGT
HEELMTNCSTYQEIAYSQLSKEELIHG

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=481141 IAQ67_RS12135 WP_190299301.1 2719065..2720828(+) (rcrP) [Paenibacillus peoriae strain ZF390]
ATGCTAAAGATATTCAAATATCTCAAGAAAAATGAATGGATGCTCGTGCTTTGCAGCCTAGCTTTCATCGTTGTGCAGGT
ATGGCTTGATCTGAAGCTGCCTGATTATATGGCGGAAATTACGACCAAGCTGCAAACGGAAGGAACGCCTGTGTCCGAAC
TGCTGATTCCCGGCAGTTACATGTTGTTTTGTGCCGTCGGCAGTATGATTGCATCTATTATTGTGGGCTACTTCGCGGCA
AAGGTGGCTGCAGGGCTGGCTATGCGTCTGCGTGCGATGGTCTTTGACAAGACCTTATCCTTTTCGATGGAAGAGATGAA
CAACTTTTCGACGGCAAGCCTCATTACCCGCTCCACGAACGATGTTACACAGATTCAAACGGTGGTTGCGCTGGGGCTGC
AGGTGATCATCAAGGCACCGATTCTGGCCGTATGGGCCATTGTGAAGATTGCGGATAAAAACTGGCAGTGGACCGCCTCC
ACAGGAGCGGCCGTAGCTGCTCTGATTCTAATGCTAAGTGTCATTGTTGTGTTCGCTCTTCCAAGTTTCCAGAGAATCCA
GCGTCTCACCGATAATCTGAACAGGGTAACACGTGAGCATCTGATCGGACTTCGGGTAGTACGCGCTTATAATGCAGATC
AGTATCAGCAGGAGAAGTTCGAGCAGGCTAACGTTGAGTTGACGAATACAAACCTGTTTGCAAACCGATTAATGACGATG
ATTGGCCCAGGTATGACCTTTATTATGTCAGGTCTGAGTGTCTCTATCTATTGTATCGGCGCTTACCTGATTAACGGGGC
GGCCGTACCAGACCGCATCACGTTGTTCTCCAATATGGTCGTATTCTCCTCTTATGCAATGCAGGTGGTTATGGCCTTTA
TGATGGTAAGTATGATATTCATTCTGATGCCTCGCGCCTCGATCTCTGCCAAACGGATCATGGAGGTTTTGAATACCGAA
TCCAGCATCGTTAACGGGCATGAGACGACTGGAGAAGAGAGCGTTATGGGGCAAGTGGAATTCCGTAATGTCAGCTTCAA
ATATCCGGACGCGGAGGAGGCCGTGCTTCGCAACATTAGCTTTACGGCGAAACGAGGCGAGACGGTTGCCTTTATTGGCG
CTACAGGCAGCGGAAAAACCAGCGTGATCAATCTGATTCCCCGTTTCTATGATGTGACCGAGGGAGAGGTACTCGTGGAT
GGTGTGAATGTCAGGAACTATAATCAGCAGGCACTCCATAACAAAATCGGGTATGTCCCCCAGAGAGCTGTACTGTTCAA
CGGTACGGTTGTATCCAACGTTTCGTATGGCGATAACGGAAGAGCAGGAGCTTCGGAGAAACTCGTTAAAGAAGCCGTTG
GTATTGCTCAAGGAACGGAGTTTGTTGAAAAAATGGATGGTCAATATCAGGGTAGAATTTCGCAAGGTGGAGCGAACGTG
TCCGGTGGTCAAAAGCAGCGGCTGTCCATTGCGCGTGCCATCTACCGTCAGCCGGAAATTTATATTTTCGATGATTCCTT
CTCGGCATTAGACTACAGAACAGACCGGATTCTGCGCTCCGCTCTCAAAAAAGAAACCGGCCATGCTACGACACTTATCG
TTGGTCAGCGCATAGGTACTATCAAAGACGCTGATCGGATTATCGTGCTGGACCAGGGAGAGATTGTAGGGAGCGGCACG
CATGAAGAGCTGATGACAAACTGCAGCACCTATCAGGAGATCGCATATTCGCAGCTTTCGAAGGAGGAACTCATACATGG
ATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-506)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H0YF25

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.421

100

0.535