Detailed information NTG0481101

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: IAU66_RS17290
• Genome accession: NZ_CP061168
• Coordinates: 3518235..3519398 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain T-5
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3513235..3524398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IAU66_RS17260	-	3513500..3513919 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
IAU66_RS17265	comFC	3513993..3514682 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
IAU66_RS17270	-	3514688..3514972 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
IAU66_RS17275	comFA	3515030..3516415 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
IAU66_RS17280	-	3516523..3517371 (-)	849	WP_024085866.1	DegV family protein	-
IAU66_RS17285	degU	3517469..3518158 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
IAU66_RS17290	degS	3518235..3519398 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
IAU66_RS17295	-	3519621..3520268 (+)	648	WP_003151384.1	YigZ family protein	-
IAU66_RS17300	-	3520273..3521487 (+)	1215	WP_014305930.1	LCP family protein	-
IAU66_RS17305	-	3521577..3522653 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
IAU66_RS17310	-	3522786..3523982 (-)	1197	WP_024085869.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=481101 IAU66_RS17290 WP_003151385.1 3518235..3519398(-) (degS) [Bacillus amyloliquefaciens strain T-5]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=481101 IAU66_RS17290 WP_003151385.1 3518235..3519398(-) (degS) [Bacillus amyloliquefaciens strain T-5]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948