Detailed information NTG0481097

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: J6342_RS01585
• Genome accession: NZ_CP072196
• Coordinates: 334791..337616 (-)
• Length: 941 a.a.
• NCBI ID: WP_014938663.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain 20190604J2-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 329791..342616

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6342_RS01570 (J6342_01570)	-	329926..331827 (+)	1902	WP_014938666.1	FISUMP domain-containing protein	-
J6342_RS01575 (J6342_01575)	-	331895..332278 (+)	384	WP_014938665.1	HU family DNA-binding protein	-
J6342_RS01580 (J6342_01580)	purH	333239..334753 (-)	1515	WP_038694348.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
J6342_RS01585 (J6342_01585)	uvrA	334791..337616 (-)	2826	WP_014938663.1	excinuclease ABC subunit UvrA	Machinery gene
J6342_RS01590 (J6342_01590)	-	337740..338684 (-)	945	WP_004918915.1	SPFH domain-containing protein	-
J6342_RS01595 (J6342_01595)	rpsA	339012..340793 (+)	1782	WP_038694347.1	30S ribosomal protein S1	-
J6342_RS01600 (J6342_01600)	-	341350..341748 (+)	399	WP_038694124.1	hypothetical protein	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 105413.26 Da
• Isoelectric Point: 7.8642

>NTDB_id=481097 J6342_RS01585 WP_014938663.1 334791..337616(-) (uvrA) [Riemerella anatipestifer strain 20190604J2-1]
MMKNRDFIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARQFLGGLERPDVDKI
EGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVSTAYSLETGKKLQSYTEEQILETIKEQYQNEKVLLLAPLVK
ARKGHYHELFVQLAKKGYSQARIDGTLQDIEYDLKLDRYKTHDIEVVIDRWIIGETASEARMQKSLSTALQMGGGVVMVQ
KYNSEEFQYFSKDLMDTATGQALPLPEPNTFSFNSPKGSCPHCKGLGTVKKINPDYLVTEPTLPFQSALLPLETYKFSKW
ALSQIKSILELFELSLLTPFNKIPKEALDYIYYGCEKEFVKDLKHAGISKKTKINFEGLIPHLEKVIEDKENYGATQVER
EFTVEEICTDCNGTRLKPESLAFKIEGKTIAEVNAMSLLDLKDWLSEIKNSFSEKNKIIAHEILKEIETRLGFLLDVGLE
YLSLSRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKSLRDLGNSVLVVEHDKDMILEADE
VLDIGPKAGKYGGKVLWQGSPKDLIKADTITADYLTGRRKIEIPEKRREGNGNSIVLKGATGNNLKNVTLKIPLGKMVVV
TGISGSGKSSLINGTLYPILNRHFYRAVQEPLPYKKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGVFSDIRTLFANLP
ESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEVRYKGKSISDVLDMTIDEAVEF
FQPIPKIYSKVKTLQEVGLGYITLGQQSTTLSGGEAQRVKLATELSKKQTGKTLYILDEPTTGLHFEDVKILMEVIQKLV
DLGNSFIIIEHNMDVIKLADHIIDVGPEGGKNGGSIIAEGTPEEIIKNKKSITGKFLKKEM

Nucleotide

• Length: 2826 bp

>NTDB_id=481097 J6342_RS01585 WP_014938663.1 334791..337616(-) (uvrA) [Riemerella anatipestifer strain 20190604J2-1]
ATGATGAAAAATAGAGATTTCATAGAGGTCTATGGTGCTAGAGAGCATAACTTAAAAAACATTGATGTTAAAATTCCTCG
TAACGAGTTAGTCGTTATTACAGGGCTATCAGGAAGTGGGAAATCTTCTTTAGCATTTGATACTATTTTTGCAGAAGGAC
AAAGGCGTTATATAGAAACATTTTCCGCCTATGCTCGGCAGTTTCTAGGTGGATTAGAACGCCCCGATGTTGATAAAATA
GAAGGACTTTCCCCTGTTATAGCTATTGAACAAAAAACCACTAATAAAAACCCTCGTTCTACTGTAGGGACGGTTACAGA
ACTTTATGATTTTCTCAGACTTCTATTTGCTAGAGTTTCCACCGCTTATTCCTTGGAAACAGGTAAAAAGCTACAAAGCT
ACACCGAAGAGCAAATTTTAGAAACCATCAAAGAACAATATCAGAATGAAAAAGTCTTGCTTCTAGCACCGCTAGTAAAG
GCTAGAAAAGGGCATTATCACGAGCTTTTTGTGCAGTTAGCAAAAAAAGGATACTCCCAGGCAAGAATAGATGGCACTTT
GCAAGATATAGAGTACGACCTTAAACTAGACCGATACAAAACCCACGATATAGAAGTAGTTATAGACCGTTGGATTATAG
GCGAAACCGCATCTGAAGCTAGAATGCAAAAATCCCTTTCTACAGCTTTGCAGATGGGGGGCGGTGTGGTTATGGTTCAA
AAATATAATTCGGAAGAGTTTCAGTATTTTTCTAAAGATTTAATGGATACCGCCACAGGACAGGCTTTACCATTACCAGA
ACCAAATACTTTTTCGTTCAATTCTCCTAAAGGGAGTTGTCCTCATTGTAAAGGTTTAGGAACTGTAAAAAAAATCAATC
CTGATTATCTGGTTACCGAGCCTACTCTACCCTTCCAGTCGGCACTATTACCATTAGAAACTTATAAATTTAGTAAGTGG
GCTTTATCCCAAATTAAAAGCATACTAGAGTTATTTGAGCTTAGCTTACTAACACCATTCAACAAAATTCCTAAAGAAGC
CTTAGACTACATCTATTACGGTTGTGAAAAAGAGTTTGTAAAAGATTTAAAACACGCAGGAATTTCCAAAAAAACTAAAA
TTAATTTTGAAGGGCTAATTCCTCATTTAGAAAAAGTTATAGAAGATAAAGAGAACTACGGTGCTACACAAGTGGAGCGA
GAGTTTACAGTAGAAGAAATCTGTACAGACTGTAACGGAACAAGATTAAAACCCGAAAGTTTAGCCTTTAAAATAGAAGG
TAAAACTATTGCTGAAGTTAATGCGATGAGCTTATTAGACTTAAAAGATTGGCTTTCGGAAATAAAAAATAGCTTCAGCG
AAAAAAACAAAATTATCGCCCACGAAATTTTAAAAGAGATAGAAACTCGTTTGGGCTTTTTATTAGACGTAGGGCTAGAA
TATCTTAGTCTTAGTAGAAGTAGTAAAACCCTTTCTGGAGGCGAATCCCAAAGGATTCGTTTGGCAACACAGATAGGCTC
GCAGTTGGTGAATGTCCTTTATATTTTAGACGAACCTTCTATTGGGCTTCACCAGAGAGATAACGAAAGACTCATCAACT
CTTTAAAAAGTTTACGAGATTTAGGAAACTCTGTTCTTGTGGTGGAACACGATAAGGATATGATTTTAGAAGCCGATGAA
GTGCTAGACATCGGACCTAAAGCTGGTAAGTATGGCGGAAAAGTCTTGTGGCAAGGCAGCCCAAAAGATTTAATAAAAGC
TGACACCATTACAGCAGACTACCTCACAGGAAGAAGAAAAATAGAAATCCCTGAAAAGAGAAGAGAAGGCAACGGTAACT
CGATTGTCCTCAAAGGAGCAACGGGCAATAATCTTAAAAATGTAACCCTAAAAATTCCTTTAGGGAAAATGGTAGTGGTT
ACGGGGATTTCAGGAAGTGGTAAGTCCTCACTGATTAACGGAACCCTCTACCCTATTCTCAACCGTCATTTCTATCGTGC
TGTGCAAGAGCCTCTACCATACAAAAAAATAGAAGGTATAGAGCATATAGACAAAATAGTAGATGTAGACCAAACGCCAA
TTGGTAGAACGCCTCGTTCTAATCCTGCCACTTATACAGGTGTGTTTTCGGATATTCGAACACTATTTGCTAACCTTCCA
GAAAGTAAAATCAGAGGTTATAAGGCAGGGAGATTTTCGTTTAATGTTAAAGGTGGACGCTGCGAAACTTGTCAAGGAGG
TGGATTGAAAGTGATTGAAATGAATTTCTTGCCTGATGTCTATGTGCATTGCGAAACTTGTAACGGCAAACGCTTTAATA
GAGAAACTTTAGAAGTAAGATATAAAGGTAAATCTATATCCGATGTCCTAGATATGACCATAGACGAAGCTGTGGAATTT
TTTCAGCCAATCCCAAAAATCTATTCTAAGGTGAAAACGCTACAAGAAGTAGGTTTAGGCTATATTACTTTAGGACAACA
GTCTACTACACTTTCGGGCGGAGAGGCTCAAAGAGTAAAATTAGCCACAGAACTCTCTAAAAAACAAACAGGTAAAACGC
TTTATATTTTAGATGAACCTACCACAGGACTGCATTTTGAAGATGTTAAGATTCTGATGGAGGTTATCCAAAAGCTAGTA
GATTTAGGAAACTCTTTTATCATTATTGAACATAATATGGACGTGATAAAACTTGCCGACCATATTATAGATGTAGGTCC
AGAAGGTGGTAAAAATGGAGGAAGTATCATCGCAGAAGGTACTCCAGAAGAAATTATAAAGAATAAAAAATCTATCACAG
GTAAATTTTTGAAAAAAGAAATGTAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-391)

• UvrA interaction domain (UvrA_inter) (135-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	51.801	100	0.52
uvrA	Streptococcus pneumoniae TIGR4	51.801	100	0.52
uvrA	Streptococcus pneumoniae D39	51.801	100	0.52