Detailed information NTG0481004

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: J6M00_RS01130
• Genome accession: NZ_CP072188
• Coordinates: 245183..248008 (+)
• Length: 941 a.a.
• NCBI ID: WP_153929150.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain 20190121E1-3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 240183..253008

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6M00_RS01115 (J6M00_01115)	-	241023..242162 (-)	1140	WP_064970957.1	acyl-CoA dehydrogenase	-
J6M00_RS01120 (J6M00_01120)	-	242287..244068 (+)	1782	WP_153929151.1	long-chain fatty acid--CoA ligase	-
J6M00_RS01125 (J6M00_01125)	-	244116..245060 (+)	945	WP_064970959.1	SPFH domain-containing protein	-
J6M00_RS01130 (J6M00_01130)	uvrA	245183..248008 (+)	2826	WP_153929150.1	excinuclease ABC subunit UvrA	Machinery gene
J6M00_RS01135 (J6M00_01135)	-	248033..248617 (+)	585	WP_153929149.1	outer membrane beta-barrel protein	-
J6M00_RS01140 (J6M00_01140)	purH	248637..250151 (+)	1515	WP_214244396.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
J6M00_RS01145 (J6M00_01145)	-	250934..251317 (-)	384	WP_064970962.1	HU family DNA-binding protein	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 105450.16 Da
• Isoelectric Point: 7.5094

>NTDB_id=481004 J6M00_RS01130 WP_153929150.1 245183..248008(+) (uvrA) [Riemerella anatipestifer strain 20190121E1-3]
MMKNRDFIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARQFLGGLERPDVDKI
EGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVSTAYSLETGKKLQSYTEEQILETIKEQYQNEKVLLLAPLVK
ARKGHYHELFVQLAKKGYSQARIDGILQDIEYDLKLDRYKTHDIEVVIDRWIIGETASEARMQKSLSTALQMGDGVVMVQ
KYNSEEFQYFSKDLMDTATGQALPLPEPNTFSFNSPKGSCPHCKGLGTVKKINPDYLVTEPTLPFQSALLPLETYKFSKW
ALSQIKSILELFDLSLQTPFNKIPKEALDYIYYGCDKEFVKDLKHAGISKKTKINFEGLIPHLEKVIEDKENYGATQVER
EFTVEEVCNGCNGTRLKPESLAFKIEGKNIAEVNAMSLLDLKDWLSEIKNSFSEKNKIIAHEILKEIETRLGFLLDVGLE
YLSLNRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKSLRDLGNSVLVVEHDKDMILEADE
VLDIGPKAGKYGGKVLWQGSPKDLIKADTITADYLTGRRKIEIPEERREGNGNSIVLKGATGNNLKNVTLKIPLGKMVVV
TGISGSGKSSLINGTLYPILNRHFYRAVQEPLPYKKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGVFSDIRTLFANLP
ESKIRGYKAGRFSFNVKGGRCEACQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEVRYKGKSISDVLDMTIDEAVEF
FQPIPKIYSKVKTLQEVGLGYITLGQQSTTLSGGEAQRVKLATELSKKQTGKTLYILDEPTTGLHFEDVKILMEVIQKLV
DLGNSFIIIEHNMDVIKLADHIIDVGPEGGKNGGSIIAEGTPEEIIKNKKSITGKFLRKEM

Nucleotide

• Length: 2826 bp

>NTDB_id=481004 J6M00_RS01130 WP_153929150.1 245183..248008(+) (uvrA) [Riemerella anatipestifer strain 20190121E1-3]
ATGATGAAAAATAGAGATTTCATAGAGGTCTATGGTGCTAGAGAGCATAACTTAAAAAACATTGATGTTAAAATTCCTCG
TAACGAGTTAGTCGTTATTACAGGGCTATCAGGAAGTGGGAAATCTTCTTTAGCATTTGATACTATTTTTGCAGAAGGAC
AAAGGCGTTATATAGAAACATTTTCTGCCTATGCTCGGCAGTTTCTAGGCGGATTAGAACGCCCCGATGTCGATAAAATA
GAAGGACTTTCACCTGTTATCGCCATTGAACAAAAAACCACTAATAAAAACCCTCGTTCTACCGTAGGGACGGTTACAGA
ACTTTATGATTTTCTCAGACTTCTATTTGCTAGGGTTTCCACGGCTTATTCCTTGGAAACAGGTAAAAAGCTACAAAGCT
ATACCGAAGAGCAAATTTTAGAAACCATCAAAGAACAATATCAGAATGAAAAAGTCTTACTTCTAGCACCGCTAGTAAAG
GCTAGAAAAGGGCATTATCATGAGCTGTTTGTACAATTAGCCAAAAAAGGATATTCCCAAGCAAGAATAGACGGCATTTT
ACAAGATATAGAATACGATCTTAAACTAGACCGATACAAAACTCATGATATAGAAGTAGTTATAGACCGTTGGATTATAG
GCGAAACTGCATCTGAAGCTAGAATGCAAAAATCACTTTCTACGGCTTTACAGATGGGTGACGGTGTAGTTATGGTTCAA
AAGTATAATTCGGAAGAGTTTCAGTATTTTTCTAAAGATTTAATGGATACCGCTACAGGACAGGCTTTACCATTACCAGA
ACCAAATACTTTTTCGTTCAATTCTCCTAAGGGAAGTTGTCCTCATTGTAAAGGTTTGGGGACGGTAAAAAAAATCAATC
CTGATTATCTGGTTACCGAGCCTACACTACCCTTCCAGTCGGCACTATTACCATTAGAAACTTATAAATTTAGTAAGTGG
GCTTTATCTCAAATTAAAAGCATTCTAGAATTGTTTGACCTTAGCTTACAAACGCCATTTAACAAAATTCCTAAAGAAGC
TTTAGATTACATCTATTACGGCTGTGATAAAGAGTTTGTAAAAGATTTAAAACACGCTGGAATTTCCAAAAAGACTAAAA
TTAACTTTGAAGGGTTAATTCCTCATTTAGAAAAAGTTATAGAAGACAAGGAGAACTACGGTGCTACACAAGTGGAGCGA
GAATTTACGGTAGAAGAGGTTTGTAACGGCTGTAACGGAACAAGATTAAAACCCGAAAGTTTAGCCTTTAAAATAGAAGG
TAAGAATATAGCTGAAGTTAATGCTATGAGCCTATTAGACTTAAAGGATTGGCTTTCGGAAATAAAAAATAGCTTTAGCG
AAAAAAACAAAATTATCGCCCACGAAATTTTAAAAGAGATAGAAACTCGTTTGGGCTTTCTGCTAGATGTAGGACTAGAA
TATCTTAGCCTTAACAGAAGTAGCAAAACCCTTTCTGGAGGAGAGTCTCAAAGGATTCGTTTAGCAACTCAGATAGGTTC
GCAGTTAGTAAATGTGCTTTATATTTTAGACGAACCTTCTATTGGGCTTCATCAGAGAGATAACGAAAGGCTCATCAACT
CTTTAAAAAGTTTACGAGATTTAGGAAACTCCGTTCTTGTGGTAGAGCATGACAAAGATATGATTTTGGAAGCTGATGAA
GTGCTAGATATTGGACCTAAAGCTGGTAAGTATGGCGGAAAAGTATTGTGGCAAGGCAGCCCAAAAGATTTGATAAAAGC
TGACACCATTACAGCAGACTACCTAACAGGAAGAAGAAAAATAGAAATCCCTGAAGAGAGAAGAGAAGGCAACGGTAACT
CGATTGTCCTCAAAGGAGCAACGGGCAATAATCTTAAAAATGTAACCCTAAAAATTCCTTTAGGGAAAATGGTAGTGGTT
ACTGGTATTTCGGGAAGTGGAAAATCTTCGTTAATCAACGGAACCCTCTACCCTATTCTTAACCGACATTTTTATCGTGC
CGTGCAAGAGCCTCTACCATACAAAAAAATAGAGGGCATAGAGCATATAGACAAAATAGTAGATGTAGACCAAACGCCAA
TCGGTAGAACGCCTCGTTCTAATCCTGCTACTTATACAGGTGTATTTTCGGATATTCGAACACTATTTGCTAACCTCCCA
GAAAGTAAAATTAGAGGTTATAAGGCAGGGAGATTTTCGTTTAATGTTAAAGGTGGACGCTGCGAAGCTTGTCAAGGAGG
TGGATTGAAAGTGATTGAAATGAATTTCTTGCCTGATGTCTATGTGCATTGCGAAACCTGCAACGGCAAACGCTTTAATA
GAGAAACTTTAGAAGTAAGATATAAAGGTAAATCTATATCCGATGTCCTAGATATGACCATAGACGAAGCTGTAGAATTT
TTTCAGCCAATCCCCAAAATCTATTCTAAGGTGAAAACGCTACAAGAAGTTGGTTTAGGTTATATTACCTTAGGACAACA
GTCTACTACGCTTTCGGGCGGGGAGGCTCAAAGGGTAAAATTAGCTACAGAACTCTCTAAAAAACAAACAGGTAAAACAC
TTTATATTTTAGATGAACCTACCACAGGGCTGCATTTTGAAGATGTCAAGATACTGATGGAGGTTATCCAAAAACTGGTA
GATTTGGGCAACTCTTTTATCATTATTGAACATAATATGGACGTGATAAAGCTTGCCGACCATATTATAGATGTAGGTCC
AGAAGGTGGTAAAAATGGAGGAAGTATCATCGCAGAAGGTACTCCAGAAGAAATTATAAAGAATAAAAAATCTATCACAG
GTAAATTTTTGAGAAAAGAAATGTAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-391)

• UvrA interaction domain (UvrA_inter) (135-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	51.907	100	0.521
uvrA	Streptococcus pneumoniae TIGR4	51.907	100	0.521
uvrA	Streptococcus pneumoniae D39	51.907	100	0.521