Detailed information NTG0480730

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: J5X95_RS06340
• Genome accession: NZ_CP072120
• Coordinates: 1239764..1242637 (-)
• Length: 957 a.a.
• NCBI ID: WP_064115334.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain GKT04
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1234764..1247637

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5X95_RS06315 (J5X95_06315)	-	1237273..1237632 (-)	360	WP_007407446.1	phage holin family protein	-
J5X95_RS06320 (J5X95_06320)	-	1237633..1237827 (-)	195	WP_007407447.1	PspC domain-containing protein	-
J5X95_RS06325 (J5X95_06325)	-	1237832..1238929 (-)	1098	WP_007614045.1	DUF4097 family beta strand repeat-containing protein	-
J5X95_RS06330 (J5X95_06330)	-	1238954..1239280 (-)	327	WP_003151444.1	hypothetical protein	-
J5X95_RS06335 (J5X95_06335)	-	1239478..1239738 (+)	261	WP_012118557.1	hypothetical protein	-
J5X95_RS06340 (J5X95_06340)	uvrA	1239764..1242637 (-)	2874	WP_064115334.1	excinuclease ABC subunit UvrA	Machinery gene
J5X95_RS06345 (J5X95_06345)	uvrB	1242645..1244630 (-)	1986	WP_003151439.1	excinuclease ABC subunit UvrB	Machinery gene
J5X95_RS06350 (J5X95_06350)	-	1244806..1245042 (-)	237	WP_003151438.1	CsbA family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106130.41 Da
• Isoelectric Point: 6.4820

>NTDB_id=480730 J5X95_RS06340 WP_064115334.1 1239764..1242637(-) (uvrA) [Bacillus amyloliquefaciens strain GKT04]
MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIISGR
KGAHVKVLDQIRKQGYVRVRIDGEMAELSEDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
QEELMFSEHHACPLCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELSLKEHAIAPWTPISSQYYPQL
LQAVCRHYGIDMETPVKDLPKHQLDKVLYGSGNERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQY
MSQKSCPTCKGYRLKKEALAVLVNGRHIGTITELSVGDALEFFKNLTLSEKDMQIADLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGAQFIPMPPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPEEVVEVKESYTGRYLKPVMERDKKRMKTLLAEKETAAT

Nucleotide

• Length: 2874 bp

>NTDB_id=480730 J5X95_RS06340 WP_064115334.1 1239764..1242637(-) (uvrA) [Bacillus amyloliquefaciens strain GKT04]
ATGGCAATTGACCGGATCGAGGTGAAAGGCGCAAGGGCGCACAATTTAAAAAACATTGATGTAACGATTCCCCGGGATCA
GCTCGTCGTCGTGACGGGGCTGTCCGGATCGGGAAAATCATCCCTTGCCTTTGACACCATTTACGCGGAAGGACAGAGGC
GGTATGTTGAATCGCTTTCTGCCTATGCGCGCCAATTTTTAGGGCAGATGGATAAGCCGGACGTTGATGCGATCGAAGGG
CTTTCTCCGGCGATCAGCATTGATCAGAAAACGACAAGCCGCAATCCGCGGTCAACCGTCGGAACGGTAACAGAGATTTA
TGATTATCTCCGGCTGCTGTACGCGAGGGTCGGGAAGCCGCACTGCCCGGAGCACGGCATTGAAATTACGTCGCAAACGA
TCGAACAGATGGTTGACCGGATTCTTGAATATCCGGAGCGGACGAAGCTTCAAGTGCTTGCGCCGATCATCTCAGGCAGA
AAAGGCGCCCATGTCAAAGTGCTTGACCAAATCAGAAAGCAAGGTTACGTAAGGGTGCGGATTGACGGAGAAATGGCCGA
GCTTTCCGAGGATATTGAACTTGAAAAAAACAAAAAGCATTCCATTGAAGTAGTCATTGACCGGATCGTTGTCAAGGAAG
GGGTTGCCGCCCGGCTTTCCGACTCGCTGGAAACCGCGCTCCGCTTAGGGGAAGGCCGTGTCATGATAGATGTCATCGGT
CAGGAGGAGCTGATGTTCAGCGAGCATCACGCCTGTCCGCTGTGCGGTTTTTCTATCGGAGAGCTTGAACCCCGGCTGTT
TTCGTTTAACAGCCCGTTCGGCGCCTGTCCGACTTGCGACGGTCTCGGCTTGAAGCTGGAAGTGGACCCTGAGCTCGTCA
TCCCCAATCCCGAGCTGTCATTAAAGGAACACGCCATCGCGCCGTGGACGCCGATCAGTTCACAATATTATCCGCAGCTG
CTTCAGGCGGTCTGCCGCCATTACGGCATTGATATGGAGACTCCGGTCAAAGACCTGCCGAAGCATCAGCTTGATAAAGT
GCTGTACGGCAGCGGCAATGAACGGATTTACTTTAAATACGAGAATGATTTCGGACAAGTGCGCGAAAATGAAATTGAAT
TTGAAGGTGTGCTGCGCAATATTGAGAGACGGTATAAAGAGACAAGCTCCGATTATATCCGTGAACAGATGGAGCAGTAC
ATGTCACAGAAATCGTGCCCGACGTGCAAAGGCTACCGGCTGAAGAAAGAAGCGCTTGCCGTTTTGGTCAACGGGCGTCA
TATCGGAACCATTACCGAACTTTCTGTCGGCGACGCGCTTGAATTTTTCAAAAACCTGACGCTGTCGGAGAAAGATATGC
AGATTGCCGATTTAATTTTAAGAGAGATTGTGGAGCGGCTCAGCTTCTTAGATAAAGTCGGTCTTGATTATCTGACGCTG
AGCCGGGCGGCGGGAACGCTGTCAGGCGGAGAAGCCCAGCGTATCAGGCTTGCGACGCAGATCGGCTCCCGTTTGTCTGG
CGTCCTGTATATTCTTGATGAGCCGTCCATCGGCCTTCACCAGCGTGACAATGACCGTCTGATCAGCGCGCTGAAAAACA
TGAGGGATCTCGGCAACACACTGATTGTCGTTGAGCATGATGAGGATACGATGATGGCTGCCGATTATTTGATAGATATC
GGTCCGGGCGCAGGCATTCACGGCGGCCGCGTCATATCGGCGGGGACGCCTGAAGAAGTGATGAATGATGCGGACTCTCT
GACCGGACGCTATTTGTCAGGGGCTCAATTCATCCCGATGCCTCCGGAGAGAAGAAAGCCTGACGGTCGGTTCATTGAAA
TCAAAGGCGCTTCAGAAAACAACCTGAAAAAAGCGAACGCCAAATTCCCGCTCGGCACTTTTACGGCGGTGACAGGTGTG
TCCGGTTCCGGAAAAAGCACGCTTGTGAATGAAATTCTGCATAAGGCGCTTGCGCAAAAGCTTCATAAAGCCAAAGCGAA
ACCGGGAAGCCATAAAGAAATCAAAGGCCTTGACCACCTTGATAAGGTGATCGACATCGACCAGGCGCCGATCGGCCGGA
CACCGAGATCAAACCCGGCAACTTATACGGGCGTGTTTGATGATATCCGCGATGTATTCGCACAGACAAATGAAGCAAAG
GTGCGAGGCTATAAAAAAGGCCGGTTCAGTTTTAATGTAAAAGGCGGGCGCTGTGAGGCCTGCCGCGGCGACGGCATCAT
CAAAATTGAGATGCATTTCCTTCCTGACGTGTACGTCCCGTGTGAAGTGTGCCACGGCAAACGTTACAACCGGGAGACGC
TGGAGGTCACATACAAAGGAAAAAGCATTTCTGACGTTCTGGATATGACGGTGGAAGATGCTCTGTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTTCAAACGCTTGCCGATGTCGGACTCGGGTATGTGACGCTCGGCCAGCCGGCGACGAC
GCTGTCAGGCGGAGAAGCGCAGCGCGTTAAGCTTGCTTCCGAACTGCATAAGCGTTCCACAGGCCGGACGCTGTATATTC
TGGACGAACCGACGACAGGACTCCACGTTGATGATATCGCAAGGCTTTTGGTTGTGCTTCAAAGACTCGTCGATAACGGT
GATACCGTTTTGGTCATTGAACACAATCTCGATATCATTAAAACGGCGGACTACATCGTCGATCTGGGACCTGAAGGCGG
AGCGGGCGGCGGCACGATCGTAGCCTCCGGGACGCCTGAAGAAGTTGTCGAAGTGAAAGAATCATATACGGGCCGCTATC
TGAAACCGGTAATGGAACGTGATAAAAAACGGATGAAAACATTGCTGGCTGAAAAAGAAACGGCAGCCACATAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-858)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

• UvrA interaction domain (UvrA_inter) (132-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	69.198	97.701	0.676
uvrA	Streptococcus pneumoniae TIGR4	69.198	97.701	0.676
uvrA	Streptococcus pneumoniae D39	69.198	97.701	0.676