Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   J5Z97_RS00255 Genome accession   NZ_CP072112
Coordinates   33535..34290 (+) Length   251 a.a.
NCBI ID   WP_023611321.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M08500     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 28535..39290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5Z97_RS00245 (J5Z97_00245) - 30938..32134 (+) 1197 WP_023611324.1 CHAP domain-containing protein -
  J5Z97_RS00250 (J5Z97_00250) - 32387..33349 (+) 963 WP_009880326.1 ribose-phosphate diphosphokinase -
  J5Z97_RS00255 (J5Z97_00255) recO 33535..34290 (+) 756 WP_023611321.1 DNA repair protein RecO Machinery gene
  J5Z97_RS00260 (J5Z97_00260) plsX 34393..35400 (+) 1008 WP_063662014.1 phosphate acyltransferase PlsX -
  J5Z97_RS00265 (J5Z97_00265) - 35393..35635 (+) 243 WP_002986713.1 phosphopantetheine-binding protein -
  J5Z97_RS00270 (J5Z97_00270) purC 35786..36490 (+) 705 WP_032467170.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29545.02 Da        Isoelectric Point: 6.9077

>NTDB_id=480501 J5Z97_RS00255 WP_023611321.1 33535..34290(+) (recO) [Streptococcus pyogenes strain M08500]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAVIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=480501 J5Z97_RS00255 WP_023611321.1 33535..34290(+) (recO) [Streptococcus pyogenes strain M08500]
ATGCAACTAACAGAATCACTAGGCATTGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGTGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACATTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGCACTGATTTA
CCGCTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAATCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O N terminal (RecO_N)

(1-73)

Recombination protein O C terminal (RecO_C)

(83-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602