Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   IBL27_RS09820 Genome accession   NZ_CP061071
Coordinates   2010571..2011341 (+) Length   256 a.a.
NCBI ID   WP_002269456.1    Uniprot ID   -
Organism   Streptococcus mutans B04Sm5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2005571..2016341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IBL27_RS09805 (IBL27_09805) - 2007192..2007854 (-) 663 WP_002262652.1 YoaK family protein -
  IBL27_RS09810 (IBL27_09810) rlmH 2008200..2008679 (-) 480 WP_002308936.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  IBL27_RS09815 (IBL27_09815) htrA 2008885..2010093 (+) 1209 WP_002262650.1 S1C family serine protease Regulator
  IBL27_RS09820 (IBL27_09820) spo0J 2010571..2011341 (+) 771 WP_002269456.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 29492.16 Da        Isoelectric Point: 10.1578

>NTDB_id=480281 IBL27_RS09820 WP_002269456.1 2010571..2011341(+) (spo0J) [Streptococcus mutans B04Sm5]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSVEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=480281 IBL27_RS09820 WP_002269456.1 2010571..2011341(+) (spo0J) [Streptococcus mutans B04Sm5]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTACACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTGTAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAACCTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-196)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.219

100

0.992