Detailed information NTG0480082

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: J4T92_RS03345
• Genome accession: NZ_CP071975
• Coordinates: 717045..719870 (-)
• Length: 941 a.a.
• NCBI ID: WP_209553374.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5118
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 712045..724870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4T92_RS03325 (J4T92_03325)	-	713801..714271 (+)	471	WP_209553371.1	hypothetical protein	-
J4T92_RS03330 (J4T92_03330)	flgR	714271..715416 (+)	1146	WP_209553372.1	sigma-54 dependent transcriptional regulator	-
J4T92_RS03335 (J4T92_03335)	-	715571..715723 (+)	153	WP_001861936.1	hypothetical protein	-
J4T92_RS03340 (J4T92_03340)	-	715979..716386 (+)	408	WP_249936653.1	hypothetical protein	-
J4T92_RS03345 (J4T92_03345)	uvrA	717045..719870 (-)	2826	WP_209553374.1	excinuclease ABC subunit UvrA	Machinery gene
J4T92_RS03350 (J4T92_03350)	hopE	720035..720856 (+)	822	WP_209553375.1	outer membrane protein	-
J4T92_RS03355 (J4T92_03355)	rsmH	721034..721960 (+)	927	WP_209553376.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	-
J4T92_RS03360 (J4T92_03360)	-	721981..722325 (+)	345	WP_001022682.1	hypothetical protein	-
J4T92_RS03365 (J4T92_03365)	-	722781..723683 (+)	903	WP_209553377.1	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 104721.63 Da
• Isoelectric Point: 8.0512

>NTDB_id=480082 J4T92_RS03345 WP_209553374.1 717045..719870(-) (uvrA) [Helicobacter pylori strain MT5118]
MQHKTIMDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSYARQFLDKVGKPNVD
KIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARVGEQFCPTCLEPISSMSASDIISQICHLEENSKIIILAPI
IKDKKGSFNDKLESLRLKGYVRAFVDGVMVRLDEEIHLHKTKKHTIEAVVDRVVINSENSSRIASAVEKALKESYGELEV
EILQDNAPSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKILDPNTPLNQGAIKVIFGYN
RSYYAQMFEGFCAYNGIDSVLCFNELNKEQQDALLYGNGTEISFHFKNSPLKRPWKGIIQIAYDMFKEQKDLSDYMSEKT
CSSCKGHRLKASSLSVQVAGLKMADFLTKPIEEVYHFFNDPTHFSYLNEQEKKIAEPILKEILERVFFLYDVGLGYLTLG
RDARTISGGESQRIRIASQIGSGLTGVLYVLDEPSIGLHEKDTLKLINTLRNLQKKGNTLIVVEHDKETIKHADFVVDIG
PKAGRHGGEVVFSGSVKELLQNNHSTALYLNGTKKIERPKFEPPKEKHFLEIKNVNINNIKNLSVQIPLKQLVCITGVSG
SGKSSLILQTLLPTAQTLLNHAKKTQSLNGVEIVGLEHLDKVIYLDQAPIGKTPRSNPATYTGVMDEIRILFAEQKEAKI
LGYSASRFSFNVKGGRCEKCQGDGDIKIEMHFLPDVLVQCDSCKGAKYNPQTLEIKVKGKSIADVLNMSVEEAYEFFAKF
PKIAVKLKTLIDVGLGYITLGQNATTLSGGEAQRIKLAKELSKKDTGKTLYILDEPTTGLHFEDVNHLLQVLHSLVALGN
SMLVIEHNLDIIKNADYIIDMGPDGGDKGGRVIASGTPLEVAKNCEKTQSYTGKFLALELK

Nucleotide

• Length: 2826 bp

>NTDB_id=480082 J4T92_RS03345 WP_209553374.1 717045..719870(-) (uvrA) [Helicobacter pylori strain MT5118]
TTGCAACATAAAACCATTATGGATAAGATCATTATTCAAGGGGCTAGGGAAAACAATCTCAAAAATATCTTTTTAGAAAT
CCCTAAAAACCAATTTGTTGTTTTTACCGGATTAAGCGGTTCGGGTAAATCCACTTTAGCGTTTGACACTTTATACGCTG
AAGGCCAAAGGCGCTATTTAGAGAGTTTGTCCAGCTATGCTAGGCAATTTTTAGACAAAGTGGGTAAGCCTAATGTGGAT
AAAATTGAAGGCCTAACCCCTGCGATTGCTATTGATCAAAAAACCACTTCTAAAAACCCTAGATCCACTGTGGGGACGAT
CACTGAGATTTATGATTATTTAAGGTTGTTGTTTGCAAGGGTTGGGGAGCAATTTTGCCCCACATGTTTAGAGCCTATTA
GTTCTATGAGCGCGAGCGATATTATTTCTCAAATCTGTCATTTAGAAGAAAATTCTAAAATCATTATTCTAGCCCCCATT
ATTAAAGATAAAAAAGGTTCGTTTAACGATAAATTAGAGAGTTTGCGTTTAAAGGGGTATGTGAGAGCTTTTGTTGATGG
GGTGATGGTGCGTTTAGATGAAGAAATCCATTTGCACAAAACCAAAAAACACACCATTGAAGCGGTGGTGGATAGGGTGG
TTATCAATAGCGAAAATTCTTCACGGATCGCTAGCGCGGTAGAAAAAGCCCTTAAAGAAAGCTATGGGGAATTAGAAGTG
GAAATCTTGCAAGACAACGCACCAAGCATAAGAAAGCATTACAGCGAGCATAAGGCATGCTTTAAATGCAAGATGAGTTT
TGAAGAATTAGAGCCTTTGAGTTTTTCCTTCAATTCGCCTAAAGGGGCGTGCGAGAGCTGTTTGGGTTTGGGGACAAAAT
TTAGCTTAGATATTAGTAAGATTTTAGATCCTAACACGCCTTTAAATCAAGGAGCGATTAAAGTGATTTTTGGGTATAAC
CGCAGTTATTACGCTCAAATGTTTGAAGGCTTTTGCGCTTATAATGGCATTGACAGCGTGCTTTGTTTCAACGAATTGAA
TAAAGAGCAACAAGACGCTCTTTTGTATGGGAATGGCACTGAAATCAGCTTTCATTTTAAAAATAGCCCCTTGAAACGCC
CTTGGAAAGGCATCATTCAAATCGCTTATGACATGTTTAAAGAGCAAAAAGATTTGAGCGATTACATGAGCGAAAAAACC
TGTTCTTCATGCAAGGGGCATCGTTTGAAAGCCTCCAGTTTGAGCGTCCAAGTCGCTGGCTTGAAAATGGCGGATTTTTT
AACTAAGCCCATTGAAGAAGTCTATCACTTTTTTAATGATCCCACGCATTTTAGCTATCTTAACGAGCAAGAAAAAAAGA
TCGCTGAACCCATTTTAAAAGAGATTTTAGAAAGGGTGTTTTTTTTATACGATGTGGGGCTAGGGTATTTGACTTTAGGG
AGGGATGCACGAACGATTAGCGGAGGGGAGAGCCAAAGGATACGAATCGCTAGTCAAATCGGGAGTGGCTTGACAGGGGT
TTTGTATGTTTTAGACGAGCCTAGTATTGGCTTGCATGAAAAGGACACGCTCAAACTCATCAACACCCTTAGGAATTTAC
AAAAAAAGGGGAACACGCTCATTGTCGTAGAGCATGATAAAGAGACGATTAAGCATGCGGATTTTGTTGTGGATATTGGG
CCAAAGGCTGGAAGGCATGGGGGTGAAGTGGTTTTTAGCGGGAGCGTGAAAGAGTTATTGCAAAATAACCATTCTACCGC
CTTGTATCTCAACGGCACTAAAAAGATTGAGCGCCCCAAATTTGAACCCCCTAAAGAAAAGCATTTTTTAGAAATTAAAA
ATGTCAATATCAATAACATTAAGAATTTGAGCGTTCAAATCCCTTTAAAACAATTGGTGTGCATTACTGGGGTGAGCGGG
AGCGGTAAAAGCTCGCTGATCTTACAAACCCTTTTACCCACCGCTCAAACCCTTTTAAACCATGCTAAAAAAACTCAAAG
CTTGAATGGGGTGGAGATTGTAGGGTTGGAGCATTTGGATAAGGTGATTTATTTAGATCAAGCCCCAATAGGCAAAACCC
CACGAAGCAACCCTGCCACTTACACAGGGGTGATGGATGAAATCAGGATTTTATTTGCCGAGCAAAAAGAAGCTAAAATT
TTAGGCTATAGCGCGAGCCGTTTTAGCTTTAATGTTAAAGGAGGGCGGTGCGAGAAGTGCCAAGGCGATGGGGACATTAA
AATAGAAATGCATTTCTTGCCTGATGTGTTAGTCCAATGCGATAGCTGTAAGGGCGCTAAATACAACCCCCAAACTTTAG
AAATCAAGGTGAAAGGCAAATCCATTGCCGATGTGTTGAACATGAGCGTAGAAGAGGCTTATGAATTTTTTGCTAAATTC
CCTAAAATCGCTGTGAAGTTAAAAACGCTTATAGATGTGGGCTTGGGCTATATCACTTTAGGGCAAAACGCTACAACTTT
AAGCGGGGGGGAGGCTCAAAGGATCAAATTGGCTAAAGAATTGAGTAAAAAAGACACAGGCAAAACCCTTTATATTTTAG
ATGAGCCCACCACCGGTTTGCACTTTGAAGACGTGAATCACCTTTTACAGGTTTTGCATTCTTTAGTGGCGTTAGGCAAT
TCCATGCTAGTGATTGAGCATAATTTAGACATTATCAAAAACGCTGATTACATTATAGACATGGGGCCTGATGGGGGGGA
TAAGGGCGGGAGAGTCATTGCGAGCGGCACGCCTTTAGAAGTGGCAAAAAATTGCGAAAAAACCCAAAGCTATACGGGAA
AATTTTTAGCTTTGGAATTGAAATAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (297-390)

• ABC transporter (ABC_tran) (621-857)

• UvrA interaction domain (UvrA_inter) (137-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	50.052	100	0.509
uvrA	Streptococcus pneumoniae TIGR4	50.052	100	0.509
uvrA	Streptococcus pneumoniae D39	50.052	100	0.509