Detailed information NTG0480037

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: J4048_RS17495
• Genome accession: NZ_CP071970
• Coordinates: 3551223..3554096 (-)
• Length: 957 a.a.
• NCBI ID: WP_040238848.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain XJ5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3546223..3559096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4048_RS17470 (J4048_17470)	-	3548732..3549091 (-)	360	WP_007407446.1	phage holin family protein	-
J4048_RS17475 (J4048_17475)	-	3549092..3549286 (-)	195	WP_007407447.1	PspC domain-containing protein	-
J4048_RS17480 (J4048_17480)	-	3549291..3550388 (-)	1098	WP_007407448.1	DUF4097 domain-containing protein	-
J4048_RS17485 (J4048_17485)	-	3550413..3550739 (-)	327	WP_003151444.1	hypothetical protein	-
J4048_RS17490 (J4048_17490)	-	3550937..3551197 (+)	261	WP_012118557.1	hypothetical protein	-
J4048_RS17495 (J4048_17495)	uvrA	3551223..3554096 (-)	2874	WP_040238848.1	excinuclease ABC subunit UvrA	Machinery gene
J4048_RS17500 (J4048_17500)	uvrB	3554104..3556089 (-)	1986	WP_003151439.1	excinuclease ABC subunit UvrB	Machinery gene
J4048_RS17505 (J4048_17505)	-	3556265..3556501 (-)	237	WP_003151438.1	CsbA family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106131.36 Da
• Isoelectric Point: 6.3470

>NTDB_id=480037 J4048_RS17495 WP_040238848.1 3551223..3554096(-) (uvrA) [Bacillus amyloliquefaciens strain XJ5]
MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIISGR
KGAHVKVLDQIRKQGYVRVRIDGEMAELSEDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
QEELMFSEHHACPLCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELSLKEHAIAPWTPISSQYYPQL
LQAVCRHYGIDMETPVKDLPKHQLDKVLYGSGNERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQY
MSQKSCPTCKGYRLKKEALAVLVNGRHIGTITELSVGDALEFFKNLTLSEKDMQIADLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGAQFIPMPPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPEEVVEVEESYTGRYLKPVMERDKKRMKTLLAEKETAAT

Nucleotide

• Length: 2874 bp

>NTDB_id=480037 J4048_RS17495 WP_040238848.1 3551223..3554096(-) (uvrA) [Bacillus amyloliquefaciens strain XJ5]
ATGGCAATTGACCGGATCGAGGTGAAAGGCGCAAGGGCGCACAATTTAAAAAACATTGATGTAACGATTCCGCGGGATCA
ACTCGTCGTCGTGACGGGGCTGTCCGGATCGGGAAAATCATCCCTTGCCTTTGACACCATTTACGCGGAAGGACAGAGGC
GGTATGTTGAATCGCTTTCTGCCTATGCGCGCCAATTTTTAGGGCAGATGGATAAGCCGGACGTTGATGCGATCGAAGGG
CTTTCTCCGGCGATCAGCATTGACCAGAAAACGACAAGCCGCAATCCGCGGTCAACCGTCGGAACGGTAACGGAGATTTA
TGATTATCTCCGGCTGCTGTACGCGAGAGTCGGGAAACCGCACTGCCCGGAGCACGGCATTGAAATTACGTCGCAAACGA
TTGAACAGATGGTTGACCGGATTCTTGAATATCCGGAGCGGACGAAGCTTCAAGTGCTTGCGCCGATCATCTCAGGCAGA
AAAGGCGCCCATGTCAAAGTGCTTGACCAAATCAGAAAGCAAGGTTACGTAAGGGTGCGGATTGACGGAGAAATGGCCGA
GCTTTCCGAGGATATTGAACTTGAAAAAAACAAAAAGCATTCCATTGAAGTAGTCATTGACCGGATCGTTGTCAAGGAAG
GCGTTGCCGCCCGGCTTTCCGACTCGCTGGAAACCGCGCTCCGTTTAGGGGAAGGCCGTGTCATGATAGATGTCATCGGT
CAGGAGGAGCTGATGTTCAGCGAGCATCACGCCTGTCCGCTGTGCGGTTTTTCTATCGGGGAGCTTGAACCCCGGCTGTT
TTCGTTTAACAGCCCGTTCGGCGCCTGTCCGACTTGCGACGGTCTCGGCTTGAAGCTGGAAGTGGACCCTGAGCTCGTCA
TCCCCAATCCCGAGCTGTCATTAAAGGAACACGCCATCGCGCCGTGGACGCCGATCAGTTCACAATATTATCCGCAGCTG
CTTCAGGCGGTCTGCCGCCATTACGGCATTGATATGGAGACTCCGGTCAAAGACCTGCCGAAGCATCAGCTTGATAAAGT
GCTGTACGGCAGCGGCAATGAACGGATTTACTTTAAATACGAGAATGATTTCGGACAAGTGCGCGAAAATGAAATTGAAT
TTGAAGGTGTGCTGCGCAATATTGAGAGACGGTATAAAGAGACAAGCTCCGATTATATCCGTGAACAGATGGAGCAGTAC
ATGTCACAGAAATCGTGCCCGACGTGCAAAGGCTACCGGCTGAAGAAAGAAGCGCTTGCCGTTTTGGTCAACGGGCGTCA
TATCGGAACCATTACCGAGCTTTCCGTCGGCGATGCGCTGGAATTTTTCAAAAACCTGACGCTGTCGGAGAAAGATATGC
AGATTGCCGATTTAATTTTAAGAGAGATTGTGGAGCGGCTCAGCTTCTTAGATAAAGTCGGTCTTGATTATCTGACGCTG
AGCCGGGCGGCGGGAACGCTGTCAGGCGGAGAAGCCCAGCGTATCAGGCTTGCGACGCAGATTGGCTCCCGTTTGTCAGG
CGTCCTGTATATTCTTGATGAGCCGTCCATCGGCCTTCACCAGCGTGACAATGACCGTTTAATCAGCGCGCTGAAAAACA
TGAGGGATCTCGGCAACACACTGATTGTCGTTGAGCATGATGAGGATACGATGATGGCTGCCGATTATTTGATAGATATC
GGTCCGGGCGCCGGCATTCACGGCGGCCGCGTCATATCGGCGGGGACGCCTGAAGAAGTGATGAATGATGCGGACTCTCT
GACCGGACGCTATTTGTCAGGGGCTCAATTCATCCCGATGCCGCCGGAGAGAAGAAAGCCTGACGGCCGGTTCATTGAAA
TCAAAGGCGCTTCAGAAAACAACCTGAAAAAAGCGAACGCCAAATTCCCGCTCGGCACTTTTACGGCGGTGACAGGTGTC
TCCGGTTCCGGAAAAAGCACGCTTGTGAATGAAATTCTGCATAAGGCGCTTGCGCAAAAGCTTCATAAAGCCAAAGCGAA
ACCGGGAAGCCATAAAGAGATCAAAGGCCTCGACCACCTTGATAAGGTGATCGACATCGACCAGGCGCCGATCGGCCGGA
CACCGAGATCAAATCCGGCAACTTACACGGGTGTGTTTGATGATATCCGCGATGTATTCGCGCAGACAAATGAAGCAAAG
GTGCGCGGCTATAAAAAAGGCCGGTTCAGTTTTAATGTAAAAGGCGGGCGCTGTGAGGCCTGCCGCGGCGACGGCATCAT
CAAAATTGAGATGCACTTCCTTCCTGACGTGTACGTTCCGTGTGAAGTGTGCCACGGCAAACGTTACAACCGGGAGACGC
TGGAGGTCACATACAAAGGAAAAAGCATTTCTGACGTTTTGGATATGACGGTGGAAGATGCTCTGTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTTCAAACGCTTGCCGATGTCGGACTCGGGTATGTGACGCTCGGCCAGCCGGCGACGAC
GCTGTCAGGCGGAGAAGCGCAGCGCGTCAAGCTCGCTTCCGAACTGCATAAGCGTTCCACCGGCCGGACGCTGTATATTT
TGGACGAACCGACGACAGGCCTCCACGTTGATGATATCGCAAGGCTTTTGGTTGTGCTTCAAAGACTCGTCGATAACGGT
GATACCGTTTTGGTCATTGAACACAATCTCGACATCATTAAAACGGCGGACTACATCGTAGACCTGGGACCTGAAGGCGG
AGCGGGCGGCGGCACGATCGTAGCCTCCGGGACGCCTGAAGAAGTTGTCGAAGTGGAAGAATCATATACGGGCCGCTATC
TGAAACCGGTAATGGAACGTGATAAAAAACGGATGAAAACATTGCTGGCTGAAAAAGAAACGGCAGCCACATAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-858)

• UvrA interaction domain (UvrA_inter) (132-238)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	69.305	97.701	0.677
uvrA	Streptococcus pneumoniae TIGR4	69.305	97.701	0.677
uvrA	Streptococcus pneumoniae D39	69.305	97.701	0.677