Detailed information NTG0479660

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: J4A01_RS16585
• Genome accession: NZ_CP071932
• Coordinates: 3356131..3359004 (-)
• Length: 957 a.a.
• NCBI ID: WP_032876195.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain CAS02
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3351131..3364004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4A01_RS16560 (J4A01_16425)	-	3353638..3353997 (-)	360	WP_007407446.1	phage holin family protein	-
J4A01_RS16565 (J4A01_16430)	-	3353998..3354192 (-)	195	WP_007407447.1	PspC domain-containing protein	-
J4A01_RS16570 (J4A01_16435)	-	3354197..3355294 (-)	1098	WP_007614045.1	DUF4097 family beta strand repeat-containing protein	-
J4A01_RS16575 (J4A01_16440)	-	3355319..3355645 (-)	327	WP_003151444.1	hypothetical protein	-
J4A01_RS16580 (J4A01_16445)	-	3355843..3356082 (+)	240	WP_032876198.1	hypothetical protein	-
J4A01_RS16585 (J4A01_16450)	uvrA	3356131..3359004 (-)	2874	WP_032876195.1	excinuclease ABC subunit UvrA	Machinery gene
J4A01_RS16590 (J4A01_16455)	uvrB	3359012..3360997 (-)	1986	WP_003151439.1	excinuclease ABC subunit UvrB	Machinery gene
J4A01_RS16595 (J4A01_16460)	-	3361173..3361409 (-)	237	WP_003151438.1	CsbA family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106185.49 Da
• Isoelectric Point: 6.4821

>NTDB_id=479660 J4A01_RS16585 WP_032876195.1 3356131..3359004(-) (uvrA) [Bacillus amyloliquefaciens strain CAS02]
MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIISGR
KGAHVKVLDQIRKQGYVRVRIDGEMAELSDDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
QEELMFSEHHACPLCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELSLKEHAIAPWTPISSQYYPQL
LQAVCRHYGIDMETPVKDLPKHQLDKVLYGSGDERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQY
MSQKPCPTCKGYRLKKEALAVLVNGRHIGTITELSVGDALEFFKRLTLSEKDMQIADLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGAQFIPMPPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGSGGGTIVASGTPEEVVEVKESYTGRYLKPVMERDKKRMKTLLAEKETAAT

Nucleotide

• Length: 2874 bp

>NTDB_id=479660 J4A01_RS16585 WP_032876195.1 3356131..3359004(-) (uvrA) [Bacillus amyloliquefaciens strain CAS02]
ATGGCAATTGACCGGATCGAGGTGAAAGGCGCGAGGGCGCACAATTTAAAAAACATTGATGTAACGATTCCGCGGGATCA
GCTCGTCGTCGTGACGGGGCTGTCCGGATCGGGAAAATCATCCCTTGCCTTTGACACCATTTACGCGGAAGGACAGAGGC
GGTATGTTGAATCGCTTTCTGCCTATGCGCGCCAATTTTTAGGGCAAATGGATAAGCCGGACGTCGATGCGATCGAAGGG
CTTTCTCCGGCGATCAGCATTGATCAGAAAACGACGAGCCGCAATCCGCGGTCAACCGTCGGAACGGTAACGGAGATTTA
TGATTATCTCCGGCTGCTGTACGCGAGAGTCGGGAAGCCGCACTGCCCGGAGCACGGCATTGAAATTACGTCGCAAACGA
TTGAACAGATGGTTGACCGGATTCTTGAATATCCGGAGCGGACGAAGCTTCAAGTGCTTGCGCCGATCATCTCAGGCAGA
AAAGGCGCCCATGTCAAAGTGCTTGACCAAATCAGAAAGCAAGGTTACGTAAGGGTGCGGATTGACGGAGAAATGGCCGA
GCTTTCCGACGATATTGAACTTGAAAAAAACAAAAAGCATTCCATTGAAGTCGTCATTGACCGGATTGTCGTCAAGGAAG
GGGTTGCCGCCCGGCTTTCCGACTCACTGGAAACCGCGCTCCGCTTAGGGGAAGGCCGTGTCATGATAGATGTCATCGGT
CAGGAGGAGCTGATGTTCAGCGAGCATCACGCCTGTCCGCTGTGCGGTTTTTCTATCGGAGAGCTTGAACCCCGGCTGTT
TTCGTTTAACAGCCCGTTCGGCGCCTGTCCGACTTGTGACGGTCTCGGCTTAAAGCTGGAAGTGGACCCTGAGCTCGTCA
TTCCCAATCCTGAGCTGTCATTAAAAGAACACGCCATCGCGCCGTGGACGCCGATCAGTTCACAATATTATCCGCAGCTG
CTTCAGGCGGTCTGCCGCCATTACGGCATTGATATGGAGACTCCGGTCAAAGACCTGCCGAAGCATCAGCTTGATAAAGT
GCTGTACGGTAGCGGCGATGAACGGATCTACTTTAAATACGAGAATGATTTCGGACAAGTGCGCGAAAATGAAATTGAAT
TTGAAGGCGTGCTGCGCAATATTGAGAGACGGTATAAAGAGACAAGCTCCGATTATATCCGTGAACAGATGGAGCAGTAC
ATGTCACAGAAGCCGTGCCCGACGTGCAAAGGCTACCGGCTGAAGAAAGAAGCGCTGGCCGTTTTGGTCAACGGGCGCCA
CATCGGCACCATTACCGAGCTTTCCGTCGGCGATGCGCTGGAATTTTTCAAAAGACTGACGCTGTCTGAGAAAGATATGC
AGATTGCCGATTTAATTTTAAGAGAGATTGTGGAGCGGCTCAGCTTCTTAGATAAAGTCGGTCTTGATTACCTGACGCTG
AGCCGGGCGGCGGGAACGCTGTCAGGCGGAGAAGCTCAGCGCATCAGGCTTGCAACACAGATCGGCTCCCGTTTGTCAGG
CGTTCTGTACATTCTTGATGAGCCGTCCATCGGCCTTCACCAGCGTGACAATGACCGTCTGATCAGCGCGTTGAAAAACA
TGAGGGATCTCGGCAACACACTGATTGTCGTGGAGCATGATGAGGATACGATGATGGCTGCCGATTATTTGATAGATATC
GGTCCGGGCGCCGGCATTCACGGCGGCCGCGTCATATCGGCGGGGACGCCTGAAGAAGTGATGAATGATGCGGACTCTCT
GACCGGACGTTATTTGTCAGGGGCTCAATTCATCCCGATGCCTCCGGAGAGAAGAAAGCCTGACGGCCGGTTCATTGAAA
TCAAAGGCGCGTCAGAAAACAACCTGAAAAAAGCGAACGCCAAATTCCCGCTCGGCACTTTTACGGCGGTGACAGGTGTG
TCCGGTTCCGGAAAAAGTACGCTTGTGAATGAAATTCTGCATAAGGCGCTTGCGCAAAAGCTTCATAAAGCCAAAGCGAA
ACCGGGAAGCCATAAAGAGATCAAAGGCCTCGACCACCTTGATAAGGTGATCGACATCGACCAGGCGCCGATCGGCCGGA
CACCGAGATCAAATCCGGCAACTTATACGGGTGTGTTTGATGATATCCGCGATGTATTCGCGCAGACAAATGAAGCAAAG
GTGCGCGGTTATAAAAAAGGCCGGTTCAGTTTTAATGTAAAAGGCGGGCGCTGTGAGGCCTGCCGCGGCGACGGCATCAT
TAAAATTGAGATGCATTTCCTTCCTGACGTGTACGTCCCGTGTGAAGTGTGCCACGGCAAACGTTACAACCGGGAGACGC
TTGAGGTCACATACAAAGGAAAAAGCATTTCTGACGTTCTGGATATGACGGTGGAAGATGCTCTGTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTTCAAACGCTTGCCGATGTCGGACTCGGTTATGTGACGCTCGGCCAGCCGGCGACGAC
GCTGTCAGGCGGAGAAGCGCAGCGCGTCAAGCTCGCTTCCGAACTGCATAAGCGTTCCACCGGCCGGACGCTGTATATTT
TGGACGAACCGACGACAGGCCTCCACGTTGATGATATCGCAAGGCTTTTGGTTGTGCTTCAAAGACTCGTCGATAACGGT
GATACCGTTTTGGTCATTGAACATAATCTCGATATCATTAAAACGGCTGACTACATCGTCGATCTGGGACCTGAAGGCGG
ATCGGGCGGCGGCACGATCGTAGCCTCCGGGACGCCTGAAGAAGTTGTCGAAGTGAAAGAATCATATACGGGCCGTTATC
TGAAACCGGTAATGGAACGTGATAAAAAACGGATGAAAACATTGCTGGCCGAAAAAGAAACGGCAGCCACGTAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

• UvrA interaction domain (UvrA_inter) (132-238)

• ABC transporter (ABC_tran) (622-858)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae TIGR4	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae D39	69.091	97.701	0.675