Detailed information NTG0479654

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: IBB93_RS06865
• Genome accession: NZ_CP061022
• Coordinates: 1327718..1328803 (-)
• Length: 361 a.a.
• NCBI ID: WP_011226304.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 24738
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1322718..1333803

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBB93_RS06835 (IBB93_06885)	-	1323082..1323897 (-)	816	WP_014608539.1	Cof-type HAD-IIB family hydrolase	-
IBB93_RS06840 (IBB93_06890)	-	1323890..1324684 (-)	795	WP_138496582.1	HAD family hydrolase	-
IBB93_RS06845 (IBB93_06895)	-	1324869..1325246 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
IBB93_RS06850 (IBB93_06900)	-	1325251..1325949 (+)	699	WP_207559903.1	ABC transporter ATP-binding protein	-
IBB93_RS06855 (IBB93_06905)	-	1325961..1326746 (+)	786	WP_002951425.1	hypothetical protein	-
IBB93_RS06860 (IBB93_06910)	amiF	1326796..1327725 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
IBB93_RS06865 (IBB93_06915)	amiE	1327718..1328803 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
IBB93_RS06870 (IBB93_06920)	amiD	1328813..1329739 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
IBB93_RS06875 (IBB93_06925)	amiC	1329739..1331232 (-)	1494	WP_011227407.1	ABC transporter permease	Regulator
IBB93_RS06880 (IBB93_06930)	amiA3	1331294..1333261 (-)	1968	WP_207563326.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39864.62 Da
• Isoelectric Point: 4.7435

>NTDB_id=479654 IBB93_RS06865 WP_011226304.1 1327718..1328803(-) (amiE) [Streptococcus thermophilus strain 24738]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGNA

Nucleotide

• Length: 1086 bp

>NTDB_id=479654 IBB93_RS06865 WP_011226304.1 1327718..1328803(-) (amiE) [Streptococcus thermophilus strain 24738]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGAAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGATGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (29-187)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	100	100	1
amiE	Streptococcus thermophilus LMD-9	100	100	1
amiE	Streptococcus salivarius strain HSISS4	96.953	100	0.97
oppD	Streptococcus mutans UA159	54.441	96.676	0.526