Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   JN057_RS02900 Genome accession   NZ_CP071871
Coordinates   549355..549621 (+) Length   88 a.a.
NCBI ID   WP_001844589.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain BVJ1JL     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 544355..554621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JN057_RS02880 (JN057_00595) - 544569..545078 (+) 510 WP_000619941.1 GNAT family N-acetyltransferase -
  JN057_RS02885 (JN057_00596) pheT 545155..547557 (+) 2403 WP_061370776.1 phenylalanine--tRNA ligase subunit beta -
  JN057_RS02890 (JN057_00597) - 547625..548626 (-) 1002 WP_000597991.1 endonuclease/exonuclease/phosphatase family protein -
  JN057_RS02895 (JN057_00598) - 548782..549229 (+) 448 Protein_576 IS30 family transposase -
  JN057_RS02900 (JN057_00599) HI0659 549355..549621 (+) 267 WP_001844589.1 helix-turn-helix domain-containing protein Machinery gene
  JN057_RS02905 (JN057_00600) metE 549881..552130 (+) 2250 WP_000108199.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  JN057_RS02910 (JN057_00601) metF 552194..553060 (+) 867 WP_000089982.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9629.24 Da        Isoelectric Point: 5.1633

>NTDB_id=479068 JN057_RS02900 WP_001844589.1 549355..549621(+) (HI0659) [Streptococcus pneumoniae strain BVJ1JL]
MEGCPSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVLASLGKILAV
VRLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=479068 JN057_RS02900 WP_001844589.1 549355..549621(+) (HI0659) [Streptococcus pneumoniae strain BVJ1JL]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAACTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGATACTAGCAGTC
GTCCGACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-75)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.74

87.5

0.523