Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   JN057_RS01090 Genome accession   NZ_CP071871
Coordinates   193589..194029 (-) Length   146 a.a.
NCBI ID   WP_000861968.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain BVJ1JL     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 188589..199029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JN057_RS01065 (JN057_00222) - 188850..190136 (+) 1287 WP_000278864.1 response regulator transcription factor -
  JN057_RS01070 (JN057_00223) - 190188..190721 (+) 534 WP_000729037.1 hypothetical protein -
  JN057_RS01075 (JN057_00224) nrdI 190799..191269 (+) 471 WP_000849618.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  JN057_RS01080 (JN057_00225) - 191562..192824 (-) 1263 WP_000075789.1 NRAMP family divalent metal transporter -
  JN057_RS01085 (JN057_00226) - 193134..193592 (-) 459 WP_000745054.1 DUF3021 domain-containing protein -
  JN057_RS01090 (JN057_00227) brsR 193589..194029 (-) 441 WP_000861968.1 LytTR family DNA-binding domain-containing protein Regulator
  JN057_RS01095 (JN057_00228) hexB 194235..196184 (+) 1950 WP_000018164.1 DNA mismatch repair endonuclease MutL Machinery gene
  JN057_RS01100 (JN057_00229) ribE 196509..196976 (-) 468 WP_001099502.1 6,7-dimethyl-8-ribityllumazine synthase -
  JN057_RS01105 (JN057_00230) - 196977..198182 (-) 1206 WP_000456639.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II -
  JN057_RS01110 (JN057_00231) ribE 198202..198837 (-) 636 WP_000493842.1 riboflavin synthase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17137.81 Da        Isoelectric Point: 5.9797

>NTDB_id=479050 JN057_RS01090 WP_000861968.1 193589..194029(-) (brsR) [Streptococcus pneumoniae strain BVJ1JL]
MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLVEIFLKNESFTYSSRRYLKTIKEKLEL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=479050 JN057_RS01090 WP_000861968.1 193589..194029(-) (brsR) [Streptococcus pneumoniae strain BVJ1JL]
ATGAAAGTAGAACTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAGCCGACAGATAAAGT
CCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGGAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAACCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGGTAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.054

100

0.363