Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   JZ789_RS04695 Genome accession   NZ_CP071806
Coordinates   900647..901129 (+) Length   160 a.a.
NCBI ID   WP_002938080.1    Uniprot ID   -
Organism   Streptococcus suis strain GX69     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 895647..906129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZ789_RS04670 (JZ789_04620) - 896895..898205 (-) 1311 WP_002938090.1 GntP family permease -
  JZ789_RS04675 (JZ789_04625) folK 898256..898744 (-) 489 WP_009910002.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  JZ789_RS04680 (JZ789_04630) folB 898741..899103 (-) 363 WP_002938086.1 dihydroneopterin aldolase -
  JZ789_RS04685 (JZ789_04635) folP 899096..899908 (-) 813 WP_044675545.1 dihydropteroate synthase -
  JZ789_RS04690 (JZ789_04640) folE 899917..900480 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  JZ789_RS04695 (JZ789_04645) mutX 900647..901129 (+) 483 WP_002938080.1 8-oxo-dGTP diphosphatase Machinery gene
  JZ789_RS04700 (JZ789_04650) - 901178..901855 (-) 678 WP_002938079.1 DUF4956 domain-containing protein -
  JZ789_RS04705 (JZ789_04655) - 901842..902585 (-) 744 WP_002938076.1 polyphosphate polymerase domain-containing protein -
  JZ789_RS04710 (JZ789_04660) - 902778..903080 (+) 303 WP_002938072.1 hypothetical protein -
  JZ789_RS04715 (JZ789_04665) - 903101..903367 (-) 267 WP_002938070.1 DUF2087 domain-containing protein -
  JZ789_RS04720 (JZ789_04670) pheT 903422..905821 (-) 2400 WP_226316958.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18496.88 Da        Isoelectric Point: 4.5662

>NTDB_id=478981 JZ789_RS04695 WP_002938080.1 900647..901129(+) (mutX) [Streptococcus suis strain GX69]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREIFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGGKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=478981 JZ789_RS04695 WP_002938080.1 900647..901129(+) (mutX) [Streptococcus suis strain GX69]
ATGACCAAGAAACCCGTCCAACTCGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAACGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGCAAACTAGAACCCGGCGAAACGCCACAGGCTTGTG
CCATTCGAGAAATCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGGCAAACTGCTTGATTACAGTGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775