Detailed information NTG0478429

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: J1N58_RS11630
• Genome accession: NZ_CP071697
• Coordinates: 2423827..2424921 (+)
• Length: 364 a.a.
• NCBI ID: WP_024418405.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1112S
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2418827..2429921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J1N58_RS11595 (J1N58_11595)	-	2418911..2419084 (-)	174	WP_207560392.1	hypothetical protein	-
J1N58_RS11600 (J1N58_11600)	-	2419172..2419930 (-)	759	WP_207560393.1	Rha family transcriptional regulator	-
J1N58_RS11605 (J1N58_11605)	-	2419946..2420644 (-)	699	WP_207560394.1	Rha family transcriptional regulator	-
J1N58_RS11610 (J1N58_11610)	-	2420680..2420886 (-)	207	WP_044679914.1	helix-turn-helix transcriptional regulator	-
J1N58_RS11885	-	2421009..2421215 (+)	207	Protein_2264	helix-turn-helix transcriptional regulator	-
J1N58_RS11620 (J1N58_11620)	-	2422137..2423303 (+)	1167	WP_207560396.1	site-specific integrase	-
J1N58_RS11625 (J1N58_11625)	yaaA	2423441..2423824 (+)	384	WP_024375815.1	S4 domain-containing protein YaaA	-
J1N58_RS11630 (J1N58_11630)	recF	2423827..2424921 (+)	1095	WP_024418405.1	DNA replication/repair protein RecF	Machinery gene
J1N58_RS11635 (J1N58_11635)	guaB	2425192..2426673 (-)	1482	WP_024418406.1	IMP dehydrogenase	-
J1N58_RS11640 (J1N58_11640)	trpS	2426902..2427927 (-)	1026	WP_099872468.1	tryptophan--tRNA ligase	-
J1N58_RS11645 (J1N58_11645)	-	2428283..2429155 (+)	873	WP_013730698.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42202.29 Da
• Isoelectric Point: 7.2520

>NTDB_id=478429 J1N58_RS11630 WP_024418405.1 2423827..2424921(+) (recF) [Streptococcus suis strain 1112S]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLADLTNYNHTLKQR
NAYLKSTDKIDETFLSVLDHQLAEFGSRVIQHRLDFLKKLERFGNKKVQEISDQKEELTIEYQSSINFTNTDNLIDNFLT
ELEKCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDNLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=478429 J1N58_RS11630 WP_024418405.1 2423827..2424921(+) (recF) [Streptococcus suis strain 1112S]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTAGGGCAAATCAAACCACTCTATCTTGCTGACTTGACTAACTACAATCATACTCTCAAGCAACGC
AATGCCTATCTAAAATCCACTGATAAGATCGACGAAACCTTTCTATCAGTACTTGATCACCAGCTTGCTGAATTCGGCAG
TCGAGTTATTCAACACAGGCTTGATTTCCTTAAAAAACTAGAGAGATTTGGGAACAAAAAAGTTCAGGAAATCTCTGATC
AAAAAGAAGAATTGACCATCGAATATCAATCCTCTATAAACTTTACAAATACTGACAACTTAATTGACAATTTCTTGACA
GAACTCGAAAAATGCCGTAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATTG
AGCTGATGAAGGAGGTCACACGAGAATACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAATTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	71.468	99.176	0.709
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442